Enoplosus armatus (old wife): 139298744
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Entry
139298744 CDS
T11455
Symbol
skic2
Name
(RefSeq) superkiller complex protein 2
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
earm Enoplosus armatus (old wife)
Pathway
earm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
earm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139298744 (skic2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
earm03019
]
139298744 (skic2)
Enzymes [BR:
earm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
139298744 (skic2)
Messenger RNA biogenesis [BR:
earm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
139298744 (skic2)
mRNA degradation factors
3'-5' decay
Ski complex
139298744 (skic2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
Ski2_N
MTR4_beta-barrel
DEAD
Helicase_C
DEXQc_Suv3
ResIII
MTR4-like_stalk
DUF3516
HTH_23
NirdL-like_HTH
Motif
Other DBs
NCBI-GeneID:
139298744
NCBI-ProteinID:
XP_070777596
LinkDB
All DBs
Position
16:complement(15551689..15567256)
Genome browser
AA seq
1245 aa
AA seq
DB search
MDRINVPPVGPMDLPLSLLEMGCSGRFELITHPLPGQPLPPQSTLPHGLPPTSLSLETEV
EKQFLRDPAWLPIHDTDFAFQRFLKVTQRDVNVDSLLNCTPSPLHSGLSVVRDPTTGMLL
DFTEVLLENTGLSAKNSLSFHRQPGPPSESLRGSNTNYPFLPGGMEELSLDQIKEKSELE
EHIDFENDLLRVPPGLKAGMDFTDKDAKIAKAEVNLMSLLSTLDDITDLQPEEEEKEEGK
GSKEAPKLPRTNSLEDLGIKDAVSSSSPPVKVKDEKSKPKENPEENKKWAIPVNISAPCD
DFYKRIPNPAFKWPFDLDVFQKQAVLRLEAHDSVFVAAHTSAGKTVVAEYAIALSQKHMT
RTIYTSPIKALSNQKFRDFKTTFGDVGLLTGDVQISPESSCLIMTTEILRSMLYNGSEVI
RDLEWVIFDEVHYINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFSEWIGRIKKRH
IYVISTMKRPVPLEHYLYTGNSTKTQKEMFLLLDAAGNFLTKGYYAAVDAKKERTSKHAQ
SFGAKNTSHNTSSSQDRAVWLTLLHFLSKRQQTPVVAFTFSRTRCDENARSLDSMDLTTS
IEKAEIHSFFQKSLSRLRGGDRQLPQILLMRDLLKRGIAVHHSGILPILKEVIEMLFSRG
LVKVLFATETFAMGVNMPARTVVFDSIRKHDGTGFRNLLPGEYIQMAGRAGRRGLDATGT
VIILCKAGVHEMADLHVMMLGKPTILQSQFRLTYTMILNLLRVEALRVTDMMRRSFSENH
RDTQTHEKRIRQLKQSVASLPPLDTEGQLSDLLPYYHTVTELRTTTESLQRAILESVNGL
KALSVGRVVLVNNKQHLNALGVILQVSNDSVNRTFTALIICEKGNEEGEGKGNSNAFAHL
YNTALFIPEGPCSHTVQKLKLQEISAITVKTLKVIPDRIIDNYNKRQQPRFRLDPPGQAI
STATQELLRLAEASPNGIASLDPVNDLQLKSVDVVEDSMRLRMLQDSLKEFNCIHSPTFA
EQFARVKERMSVQEELDRLQFLVSDQSLSLLPEYHQRIKVLQSLQYVDSGGAVQLKGRVA
CQISSHELLLTELLFENVLSPLAPEESAALLSCLVFTQNTQVEPHITNTLQEGIDRVLSV
AQRIGELQRECGLPQTAEEFVGQFKFGLTEVVYCWARGMPFAEIAQLTDVQEGTVVRCIQ
RLDEVLKEVRQAARIVGDSVLGSKMERASLAIRRDIVFTASLYTH
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atggacagaataaatgtgccccctgtgggccccatggacctgccgctgtccctgctggag
atgggatgctccggcaggtttgagctcatcacacaccccctgcctggccagcctttacct
ccacagagcacgctcccccatgggcttcctcccaccagcctgagcctggagacagaagta
gagaaacagtttttacgggaccctgcctggcttcctatacacgacacagactttgccttc
cagaggtttctcaaggtgactcagagagacgttaatgtcgactctctactcaactgcact
ccgtctccacttcactctggtctctctgttgtcagagatccaaccacagggatgctgctg
gacttcacagaggtgttattggagaatactggcctctcagcaaagaactcactttcattt
catcggcaacccgggccgccttcagagagccttcgaggaagcaacaccaactaccccttc
ctccccggaggaatggaggagcttagtctggaccaaatcaaggagaagtctgagctggag
gagcacatcgactttgagaatgatttactcagagtcccacctggacttaaagctgggatg
gacttcactgacaaagatgccaagatagcaaaggcagaggtcaacctcatgtccctcctg
tccacactggatgacatcaccgatttgcaacctgaggaagaggagaaagaggaaggcaaa
ggaagtaaagaagctcctaaactacccagaacaaacagccttgaagacctgggcatcaag
gatgctgtttcatcctcgtctcccccagtgaaagtaaaagatgagaaatcaaagccaaaa
gagaacccagaggaaaataagaaatgggccatccctgtcaacataagtgcaccctgcgat
gatttctataaacgcatccccaacccagctttcaaatggccgtttgatctggatgttttc
cagaaacaggctgtgctgaggctggaggctcacgactctgtgtttgtagccgcgcacacg
tcagctggcaaaaccgtggtggccgagtacgccatcgctctctcacagaaacacatgaca
aggaccatctacacctctcctatcaaagccctgtccaatcagaagttcagagactttaag
accacctttggagacgttggactcctgacgggcgacgttcagatcagtcctgaatcttca
tgtctcatcatgaccaccgagatcctcaggtcaatgctttacaacggctcagaggtcatc
agagacctggagtgggtgatctttgacgaggttcactacatcaacgatgctgagagaggg
gttgtatgggaggaggttttgattatgcttcccgatcacgtcagtatcattctccttagc
gccaccgtgccaaatgctctggagtttagcgagtggatcggtcgtataaagaagaggcat
atttacgtgatcagcacaatgaagagacctgtgcctttggagcattatctgtacactgga
aacagcaccaagactcagaaagagatgttcctgctactggacgctgcgggcaacttcctc
actaaaggatactatgcagccgtcgatgccaagaaggagcgcaccagcaaacatgcccaa
tcatttggtgcgaaaaacacttctcataacacctcatctagtcaggaccgagcagtgtgg
ctcactctcctgcacttcctgtccaagcggcagcagacaccggtggttgcgttcaccttc
tctcggacgcgctgcgacgagaatgcccgctcactggactccatggacttgaccacctcc
atagagaaggccgagatccactcattcttccagaagagcctgagtcgcctccgaggagga
gaccgacagctgcctcaaatcttgctcatgagggacctgttgaagagggggatagcagtc
catcacagcgggatcctgccaatactgaaggaggtcattgagatgctcttctctcgaggt
ctcgtcaaggtgctttttgccaccgagacatttgcgatgggagtgaacatgcctgctcgg
actgtggtgttcgacagcatcaggaaacatgacggaaccggctttagaaatctgctgcca
ggtgagtatattcagatggcgggcagagcaggcagaagaggtctggacgccacgggcacc
gtcatcattctgtgtaaagccggagttcacgagatggcggatctgcatgtcatgatgctg
ggtaaacctaccatcctccagtcccagttcagactgacctacactatgatcctcaacctg
ctgcgagtcgaagccctccgtgtgaccgacatgatgaggaggagcttctctgaaaaccac
agggacactcagactcatgagaagaggatcaggcagctgaagcaatcggtggcctctctg
cctcctctggacacagaaggccagctgtccgacctgttgccttactaccacaccgtgaca
gagctacgaaccaccaccgagtccctccagcgcgctattctggagtctgtcaacgggctg
aaggctctgtctgtgggtcgagttgtgttggttaacaacaaacagcatctcaacgccctg
ggagttatcctacaggtgtccaatgactctgtgaatcgcaccttcacagctctcatcatc
tgtgagaagggaaacgaggaaggggaaggaaaaggcaacagcaacgctttcgctcacctc
tacaacacagccctcttcatacctgaaggcccctgcagccacacggtgcagaagttgaag
cttcaggaaatctcggccatcacagtgaaaacactcaaagtgattccagacaggatcatc
gacaactacaacaagaggcagcagccacgattcaggcttgaccctcctggtcaggccatc
tccacggcgacccaggagctcctgcgattggccgaggccagccccaacggcatagcgagc
cttgaccctgtgaacgacctccagttgaagagcgtcgatgtggtggaggactccatgagg
ctgcgcatgctgcaggacagcctcaaagagttcaactgcatccactcgcccactttcgca
gagcagtttgctcgggttaaggagaggatgagtgtgcaggaggagctggacaggctgcag
ttcctggtgtcagaccagtctctgtctctgctgcctgaataccaccagaggatcaaggtg
ctgcagtcccttcagtacgtcgacagcggcggggcggtgcagctgaaaggccgcgtagct
tgtcagatcagcagccacgagctgctgctgaccgagctgctgttcgagaacgtcctgagc
ccgctggccccggaggagagcgccgccctgctgtcctgtctggtcttcacacagaacaca
caggtggagccgcacattacgaacacactgcaggagggcatcgatcgggtgctgtcagtg
gcccagcgtatcggagagctgcagagggagtgtgggttaccacagacagctgaggagttt
gttggccagtttaagtttggcctgacagaggtggtgtactgctgggccagaggcatgccg
tttgccgagatcgcccagctgacagacgtgcaggagggcaccgtggtccgctgcatccag
cgcctggacgaggtgctgaaggaggtgcgacaggccgcccgcatcgtgggagactccgtc
ctggggagcaagatggagagggcctccctggccatccgcagggacatcgtcttcaccgcc
tccctctacacccactga
DBGET
integrated database retrieval system
