Enoplosus armatus (old wife): 139300090
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Entry
139300090 CDS
T11455
Symbol
xab2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
earm Enoplosus armatus (old wife)
Pathway
earm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
earm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139300090 (xab2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
earm03019
]
139300090 (xab2)
03041 Spliceosome [BR:
earm03041
]
139300090 (xab2)
Messenger RNA biogenesis [BR:
earm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
139300090 (xab2)
Spliceosome [BR:
earm03041
]
Complex B
Other components
Prp19-related factors
139300090 (xab2)
Complex C
139300090 (xab2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
Suf
TPR_2
TPR_12
TPR_8
TPR_15
ARM_TT21_C
TPR_16
ARM_TT21
TPR_MalT
NRDE-2
SNAP
TPR_1
Motif
Other DBs
NCBI-GeneID:
139300090
NCBI-ProteinID:
XP_070779174
LinkDB
All DBs
Position
17:14293760..14301141
Genome browser
AA seq
850 aa
AA seq
DB search
MPSLNGQTDVMFEDDDLPYEEEIIRNPYSVKCWVRYIEFKQNGPKSTLNMIYERALKELP
GSYKLWYNYLRERRKQVKGKCITEPGYEEVNNCHERALVFMHKMPRIWLDYCQFLVSQCK
ITRSRQTFDRALRALPVTQHPRIWPLYLRFVRNLPLPETAIRVYRRYLKLSPENAEEYID
YLRSVGRLDEAAVRLAAVVNDESFVSKEGKSNYQLWHELCDLISQNPDKVTSLNVGAIIR
GGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAILTVVTVRDFTQVFDSYAQFEES
MIAAKMETTAEMGQDEDDDIDMELRLARFEQLIARRPLLLNSVLLRQNPHNVHEWHKRVK
LYEGNPRQIINTYTEAVQTVDPMKATGKPHSLWVSFAKFYEENEQLDDARTIFEKATKVN
YKQVDDLAAVWCEYGEMELRHENYEQALRILRKATAIPSKKAEYFDASEPVQNRVYKSLK
VWSMLADLEESLGTFQSTKAVYDRIIDLRIATPQIIINYAMFLEEHNYFEESFKAYERGI
ALFRWPNVYDIWNTYLTKFIDRYGGKKLERARDLFEQALDGCPAKFAKTIYLLYAKLEEG
YGLARHAMAVYERATQAVETEERHHMFNIYIKRAAEIYGVTYTRAIYQKAIEVLPDEHAR
DMCLRFADMESKLGEIDRARAIYSYCSQICDPRVTANFWQTWKEFEIRHGNEDTIREMLR
IKRSVQATYNTQVNFMSSQMLKATTSSTGTVSDLAPGQMGIDDMKMLEQKAQQLAAEAEQ
DKPKPKEKILFIRSDTSRSELAELSKQANPDEIDIDDDDEDEDDENQGPDEVQLEQKSVP
TAVFGGLKDD
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgccttcgctaaacggacaaaccgatgttatgtttgaggacgatgatctgccttatgaa
gaggagattatccggaacccatactctgtcaagtgctgggtgcgttacatcgaatttaaa
cagaacggacccaaatccaccctcaacatgatatatgagcgggctctgaaagagctgcct
ggcagctataagctgtggtataattatctgagagaaagacggaaacaagtcaaagggaaa
tgtatcactgaaccaggctatgaagaagtcaataattgccatgaaagggcactggtattc
atgcataagatgcctagaatatggcttgattactgccagttccttgtgtctcaatgcaag
atcacaagaagtcggcaaacattcgaccgtgcacttagagctcttcctgttactcagcac
ccacgcatctggcctctgtatctccgctttgtccgcaacctgcccctgcccgagacagcc
atccgggtgtaccgcaggtaccttaagctttctccagagaatgcagaggaatacatagac
tacttaaggtctgttggccgcttggatgaagcagctgtgcggctggcagctgttgtcaat
gacgaaagctttgtgtcaaaagagggcaagtctaactatcaactgtggcatgagctatgc
gaccttatctcccagaaccctgataaggtgacctctctgaatgtaggagccatcatccga
ggaggcctcactcgcttcacagaccaacttggaaaactttggtgctctttagctgactat
tacatcaggagtggtcactttgagaaggcccgtgatgtgtatgaggaggccatccttaca
gtggtaacagtaagggatttcacacaagtgtttgatagttatgcccagtttgaagagagc
atgatcgcagcgaagatggagaccactgctgagatggggcaggatgaagatgacgacata
gacatggagcttagactggcccgctttgagcagctgatagcccggcggcccctcttgttg
aacagtgtcctacttcggcagaaccctcataatgtccatgagtggcataaacgggtaaaa
ctgtatgagggcaatccacggcagatcatcaacacatacactgaggcagtacagactgtg
gatccaatgaaggccacagggaagcctcactctctctgggtttcctttgctaaattctat
gaggaaaatgagcagctggatgatgccaggacaatttttgagaaggctaccaaggtgaac
tacaagcaggtggatgaccttgctgcagtgtggtgtgaatatggagagatggagctacgc
catgagaactatgaacaggcactgcgcatactgaggaaagctacagccatcccatccaag
aaagcagaatactttgatgcatctgagccagttcaaaacagagtctacaagtccctgaag
gtctggtctatgctggcagacttggaggagagtcttggcactttccagtctacaaaagca
gtgtatgaccgcattattgacctccgcatcgccacaccacagatcatcatcaattatgcc
atgttccttgaagagcacaactactttgaggaaagcttcaaagcatatgagcgtggcatc
gctctcttcaggtggccaaatgtttatgacatctggaacacttacctcaccaagttcatt
gatcgttatgggggcaagaagctggagagagctagagatttatttgaacaagccctggat
ggctgccctgccaagtttgccaagaccatttacctgttgtatgccaaattggaggaggga
tacggattggcacgacacgccatggctgtctatgaaagagcaacgcaggcagtagaaact
gaggagagacatcacatgttcaatatctacatcaagagagcagctgaaatttatggagtc
acatataccagagcaatttaccagaaagctattgaggtccttcctgatgagcatgcgagg
gacatgtgtctgcgatttgctgacatggagagtaaactgggtgagattgatcgggccaga
gcaatctactcctactgctcccagatctgtgaccccagggtgactgctaatttctggcag
acctggaaagaatttgagatccgccatggaaatgaggacactattagagaaatgctgagg
atcaaacgcagtgtccaggccacatacaacacccaggtcaactttatgtcctctcagatg
cttaaggccacaacaagctccacaggcactgtgtcagatcttgctccaggccaaatggga
attgatgacatgaagatgctggagcagaaagcacagcagcttgctgcagaggctgagcag
gacaaacccaagcccaaagagaagattctctttatcaggagtgacacctctcgtagtgag
ttggctgagctttccaaacaagccaatcctgatgagatcgatattgatgatgatgacgag
gatgaagatgatgaaaaccagggaccagatgaggtgcagcttgaacagaagagtgtcccc
acagctgtcttcggagggcttaaagatgactga
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