Enoplosus armatus (old wife): 139301507
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Entry
139301507 CDS
T11455
Symbol
mtrex
Name
(RefSeq) exosome RNA helicase MTR4
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
earm Enoplosus armatus (old wife)
Pathway
earm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
earm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139301507 (mtrex)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
earm03019
]
139301507 (mtrex)
03041 Spliceosome [BR:
earm03041
]
139301507 (mtrex)
03009 Ribosome biogenesis [BR:
earm03009
]
139301507 (mtrex)
03016 Transfer RNA biogenesis [BR:
earm03016
]
139301507 (mtrex)
Enzymes [BR:
earm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
139301507 (mtrex)
Messenger RNA biogenesis [BR:
earm03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
139301507 (mtrex)
Spliceosome [BR:
earm03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
139301507 (mtrex)
Complex C
U4/U6.U5 tri-SnRNP related factors
139301507 (mtrex)
Ribosome biogenesis [BR:
earm03009
]
Eukaryotic type
Pre-60S particles
Helicases
139301507 (mtrex)
Transfer RNA biogenesis [BR:
earm03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
139301507 (mtrex)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139301507
NCBI-ProteinID:
XP_070781028
LinkDB
All DBs
Position
18:6709615..6729769
Genome browser
AA seq
1037 aa
AA seq
DB search
MADAFGDGLFSVFDDEQQTTTSKKIPASLAADIGKVAGKNGTDKDAGPSPRVKREADSDG
GEEAVFGKKPRHETVSANDLNLAEFMPQVKVEQVETVEGCSHEVALPASDEYKPLKARVG
KAAKEYPFVLDPFQREAILCIDNNESVLVSAHTSAGKTVCAEYAIALALREKQRVIFTSP
IKALSNQKYREMYEEFQDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEIMREVAWVV
FDEIHYMRDSERGVVWEETIILLPDNVHYVFLSATIPNARQFAEWICHLHKQPCHVVYTD
YRPTPLQHYIFPAGGDGLHLVVDENGDFREDNFNTAMQVLRDAGDSGTSGGGKWDPRGRK
GGTKGPSSVFKIVKMIMERNFQPVIIFSFSKKECEAYALQVAKLDFNRDDEKRLVEEVFN
NAVDCLSDEDKKLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLLKALFATETF
AMGINMPARTVLFTSARKFDGKNHRFITSGEYIQMSGRAGRRGMDDRGIVIFMVDEKMSP
AVGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEINPEYMLEKSFYQFQHYRALPGVVEKI
KKYEEQYHAIEIPNEEGVVTYFKIRQQLAKLGKEIQEFTHKPKYCLPFLQPGRLVKVKND
DADFGWGVVVNFCKKSNVKVSHTDSEPLYVVEVLVHCSKDSLKDAATEAAKPAAPGETGE
MQVVPVMLHLLTSISSVRLYIPKDLRPFDNRQLMLKSIQEVQKRFPDGVPLLDPIDDMGI
KDPALKKVIQKVEAFEHRMYSHPLHSDPNLESVYSLCEKKALIAADVRTAKRELKKARTV
LQMDKLKCRKRVLRRLGFASPSDVIEMKGRVACEISSGDELLLTEMIFNGLFNDLTVEQA
TALLSCFVFQENASEMPKLTEQLAAPLRQMQECAKRIAKVSADAKLEVDEETYLNQFKPH
LMDVVYAWANGATFAQICKMTDVFEGSIIRCMRRLEEVLRQMCSAAKAIGNTELENKFAE
GITKIKRDIVFAASLYL
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgcctttggagacggtttgttcagcgtgtttgacgatgaacaacaaacgacc
acgagcaaaaagatacccgcttctttggcagcagacatagggaaagttgcaggcaaaaat
ggcactgacaaggatgctggtccatctccccgggtcaagagggaggcagacagtgacggc
ggggaggaggcggtgtttgggaagaaacctcgacatgagacagtctctgctaatgaccta
aatcttgcagaatttatgccccaagtgaaggtggagcaagttgagactgtggaaggatgc
tcacatgaggtcgctctgcctgcaagtgatgaatataaaccactgaaagcgcgagtgggg
aaagcagcaaaggagtacccttttgttctcgacccgttccagcgtgaggccatcttgtgt
attgacaacaacgagtctgtgcttgtgtctgcgcacacctctgctggcaagactgtctgt
gctgaatatgccattgcactggccctcagagagaagcagagggtgatcttcaccagcccc
atcaaggccctctccaaccagaagtacagagagatgtacgaggagttccaggatgtggga
ctgatgactggtgatgtcaccatcaaccccaccgcctcctgccttgtcatgacaacagag
atcctgaggagcatgctgtaccgaggctctgagatcatgagggaagtggcgtgggtcgtc
tttgatgagatccattacatgagagattcagagcgtggtgtggtgtgggaggagaccatc
attcttcttcctgacaatgtgcattacgtcttcctgtcagccaccatccccaatgccaga
cagtttgctgagtggatctgccacctacataagcagccatgccatgtagtctacacagac
taccgtcccactccactgcaacactacatcttcccagcagggggcgatggactccacctg
gttgttgatgaaaatggagacttcagagaggacaatttcaacacagctatgcaggtgctg
agagacgcaggggattctgggaccagcggagggggcaagtgggacccgagaggacgtaaa
ggaggcactaaaggtccatccagtgtgttcaagatagtgaagatgatcatggagaggaac
ttccagcctgtcatcattttcagcttcagcaagaaagagtgtgaggcctacgctctgcag
gtggccaaactggactttaacagagatgatgagaaacgtctggtggaggaagtgttcaac
aacgcagtggactgtctttcagacgaagacaagaaactccctcaggtggagcatgtgctg
ccacttttgaagagggggataggaatccatcatggaggcctgctgcccatcctgaaagag
accatagagatccttttctctgaaggcctgctcaaggccctgtttgctacagagacattc
gccatgggcatcaacatgccggctcgcactgtgctcttcaccagcgcacgcaagtttgat
ggcaagaatcaccgctttattacatcaggtgagtacatccagatgtctgggcgagctggg
aggagaggaatggacgacaggggaattgttattttcatggtggacgagaagatgagtcca
gctgtgggcaaacagctgcttaagggctctgcagaccctttgaacagtgccttccacctg
acctacaacatggtgctcaacctgctgcgtgtggaggagatcaacccggagtacatgctg
gagaagtctttctaccagttccaacactacagggctttgcctggtgttgtggagaaaata
aagaagtatgaggagcagtaccacgccattgagattcccaacgaagagggcgtggtcact
tactttaaaatcagacagcagctcgccaaactgggtaaagagatacaagagttcacccac
aaacccaaatactgcttgccgttcttgcagcctgggcgacttgtcaaggtaaaaaatgac
gacgctgactttggctggggggttgttgtgaacttttgcaagaagtctaatgtgaaggta
agtcatacagactcagagccgctgtatgtggtggaggttttggtccactgtagtaaggac
agcttaaaagatgctgcaactgaggctgctaaacctgctgctcctggggagacaggagag
atgcaggtggtcccagtgatgcttcatctactgacttccatcagctcagttcgcctttac
atccccaaagacctgaggccctttgacaacagacagctcatgctcaagtctatacaggag
gtgcagaaacgtttcccagatggcgttcctctgctcgaccccatagatgacatgggcatc
aaagacccggcactgaagaaagttattcagaaagtggaggccttcgagcaccgcatgtac
tcccaccccctgcacagtgaccccaacctggaatctgtctattctctctgtgagaagaaa
gctctgattgcagcagacgttcgaacggccaagcgagagctgaagaaagctcggaccgtc
ctgcagatggacaagctgaagtgcaggaagagagttctgcgacgccttggcttcgccagt
ccgtccgatgtcatcgagatgaaagggcgggtagcctgtgaaattagcagtggtgatgaa
ctcctgctgacggagatgattttcaacggcctcttcaacgatctgacggttgaacaagcc
accgccctgctgtcctgcttcgtcttccaggagaatgccagcgagatgccaaaactgacc
gaacagctagcagctcccttgagacaaatgcaggagtgtgcgaagcgcatagccaaggtt
tctgcagacgccaagctggaagtggacgaggagacttatctaaaccagttcaagccccac
ctgatggatgtggtgtacgcctgggctaacggcgccacgtttgctcaaatctgcaagatg
accgacgtctttgaagggagcatcatccgctgcatgcgccgcctggaagaggtactgaga
caaatgtgttctgcagccaaggctataggcaacactgagctggagaacaagtttgcagaa
ggcataacgaagatcaagagagacattgtatttgctgccagtctctacctataa
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