Enoplosus armatus (old wife): 139302868
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Entry
139302868 CDS
T11455
Name
(RefSeq) ATP-dependent RNA helicase DHX8-like isoform X1
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
earm Enoplosus armatus (old wife)
Pathway
earm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
earm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139302868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
earm03041
]
139302868
Enzymes [BR:
earm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
139302868
Spliceosome [BR:
earm03041
]
Complex C
Other components
Step II factors
139302868
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
WHD_HA2
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
AAA_16
Flavi_DEAD
T2SSE
PhoH
Sigma54_activ_2
TsaE
ABC_tran
Motif
Other DBs
NCBI-GeneID:
139302868
NCBI-ProteinID:
XP_070782575
LinkDB
All DBs
Position
20:3464970..3474408
Genome browser
AA seq
1220 aa
AA seq
DB search
MADGGVDELSQLEYLSLVSKVCTELDNHLGISDKDLAEFVIDLAEKQPTFDGFKALLLQN
GAEFTDSLIGNLLRLIQTMRPPSKASSTKAAEVLVKPKSEKDKLKEMFPALCRANDPAPK
KLLDEDDVKVAADAMKELEMFMPSVSGTDTKSSKSRSEKTRRHSRSRSRSRERDRHRDRD
RDRDRDREKDRKRRHRSRSRSRSRSRDRDRHRDRERDRDRGKRRDKSSRWTERSPSPKKD
QDRDSDRWKDKHVDRPPPEEPSVGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELR
REGRVANVADVVSKGQRVKVKVLSFTGSKTSLSMKDVDQETGEDLNPNRRRNVGPDGGEE
ISMRNPDRPSNLNLGHAPELEQDDTLERKRLTKISDPEKWEIKQMIAANVLSKEEFPDFD
DETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPVKIVKNPDGSLSQAAMMQS
ALAKERRELKQAAREAEMDSIPMGLNKHWVDPLPDADGRQIAANMRGIGMMPNDIPEWKK
HAFGGNKASYGKKTQLSILEQRESLPIYKLKEQLIQAVHDNQILIVIGETGSGKTTQITQ
YLAEAGYTTRGKIGCTQPRRVAAMSVAKRVSEEYGCCLGQEVGYTIRFEDCTSPETVIKY
MTDGMLLRECLIDSELGQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRTDMKLIVTSATL
DAVKFSQYFYEAPIFTIPGRTYPVEVLYTKEPETDYLDASLITVMQIHLTEPPGDILVFL
TGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATN
IAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCY
RLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQ
LYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYR
PKDKQALADQKKAKFHQPEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRK
QMLGIMDRHKLDVVSCGKATVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSA
LFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFSPAFFKVSDPTRLSKQKKQQRLEP
LYNRYEEPNAWRISRAFRRR
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atggcagacggtggagttgacgagctatcgcagcttgaatatttgtctttggtgtctaag
gtctgcacggagcttgacaaccatctgggaataagtgacaaagatttagctgaatttgtc
atcgaccttgctgaaaaacaaccgacgtttgatggattcaaagctcttttgcttcaaaat
ggagccgaattcacagattctctcatcggtaatttgctcaggctcattcagactatgcgt
cctccatccaaagcatcttcgactaaagccgctgaggttttggtcaagccgaagtcagaa
aaggataagttgaaggagatgtttcctgcactgtgtagagcaaatgatccagcaccaaag
aagctactagatgaagatgatgtgaaagtagcagctgatgccatgaaagagctggagatg
ttcatgcccagtgtcagtgggacagacaccaaaagcagcaagagcaggtcagaaaagacc
agacgccacagtcgaagtcgcagcagaagcagagaacgagaccgacacagagaccgggac
cgagacagggacagagatcgggagaaggacaggaagagacggcatcgttctcgctccagg
tccaggtctcgctccagagaccgtgatcgacacagagatagagagagagacagagatcgc
ggcaagagaagagacaaatcttcccgctggactgagcgctcacctagccccaaaaaagac
caagacagagactctgaccgctggaaggacaaacatgtggaccgccctccaccggaggag
ccttctgttggtgacatctacaacggcaaagtcaccagtatcatgcagtttggatgcttt
gttcagctggagggattaaggaaacggtgggagggtttggtccacatttccgagctgcgt
agagagggccgtgtggccaacgtggccgatgttgtcagcaaaggccaaagagtcaaggtc
aaggtgctctcattcactggctctaagaccagcctcagcatgaaggatgtggaccaggag
acgggagaagacctgaaccccaacaggaggaggaacgtaggcccagacggaggggaggag
atctccatgaggaaccccgaccggccgagcaacctgaacctgggccacgcccctgagctg
gagcaggacgacaccctggagcgcaagaggctcaccaaaatttctgacccagagaagtgg
gagatcaaacagatgattgctgccaacgtcttgtccaaagaagagttccctgactttgac
gatgagacagggatccttcctaaagttgatgatgaagaggatgaagatttggaaattgag
ctggttgaagaggaacccccattcctgaggggacacaccaaacaaagcatggatatgagc
cctgtcaagattgtcaagaatccagatggttctctatctcaagcggccatgatgcagagc
gctctggctaaagagagaagagagctgaagcaggctgcacgagaggcagagatggactcc
atccccatggggctgaataaacactgggtcgaccctctgccagacgcggatggtaggcag
attgcagccaacatgagaggcattggcatgatgcccaatgacatcccagagtggaagaag
catgcttttggaggcaacaaggcctcctatggaaagaagacccagctctccatcctggag
cagagggagagcctgcccatctacaagctgaaggagcagctcattcaggctgttcatgac
aaccagatcctgattgtgatcggagagacggggtctggtaagaccacacagatcactcaa
tacctggcggaggcaggttacaccaccagggggaagattggctgtacgcaaccccgtcgt
gtggccgccatgtcagtggccaagagagtgtctgaggagtatggttgctgtctaggacag
gaggtgggttacactatccgttttgaggactgcaccagccctgagacggtgatcaagtac
atgacagacggtatgctgttgagagagtgcctgatagactctgaattgggccagtacgcc
attatcatgttggacgaagctcacgagaggacaatccacactgatgtcctctttggtttg
ctgaagaagactgtacagaaacgcacagacatgaagctgattgtaacatcggctacactg
gacgctgtgaagttctctcagtatttctatgaagcgcccatcttcaccatcccaggaaga
acctatccagtggaggttctctacaccaaagaacctgagacggactacctggatgccagt
ctcatcacagtcatgcagattcatctgaccgaacctccaggtgacatcctggtgtttctg
actggacaggaagagatcgacaccgcctgtgagatcctgtatgagcgaatgaagtcactg
gggcctgatgttcctgaactgattattctgccggtttattctgccctgcccagtgagatg
cagaccaggatctttgaccctgcacccccgggcagcaggaaggtggtcattgcgacaaac
attgcagagacatctctgaccatcgatggaatctattatgtagtggatcctggttttgtc
aagcaaaaagtctacaactctaagactggcattgaccagctggtggtgactcccatctca
caggcccaggccaagcagagggcaggtcgagccggcagaacgggtccagggaagtgttac
agactctacaccgagagagcctacagagacgagatgctaacgaccaacgtgcctgagatc
cagagaaccaacttggccagcactgtgctgtccctgaaggccatgggcatcaatgacctc
ctgtcttttgacttcatggacgctcctcccatggagactctgatcacagccatggagcag
ctctacactctgggagcgttggacgatgagggcttactcacacggctgggaagaaggatg
gctgagttccctctggagcccatgctgtgtaagatgttgatcatgtccgtccatctgggc
tgcagtgaggagatgctcaccatcgtgtcaatgctgtctgtgcagaacgtcttctacagg
ccgaaggacaagcaggccttggctgaccaaaagaaggcaaagtttcaccaacccgagggt
gatcacctgaccttgctggcggtctacaactcctggaagaacaacaagttctccaacccc
tggtgttatgagaacttcatccaggctcgctccctgcgcagagcccaggacatccgcaaa
cagatgctgggtatcatggacagacataaactggatgtggtatcttgtggcaaagccaca
gtacgggtccagaaagccatctgcagtggcttcttcaggaatgcagccaaaaaggatcct
caagagggctaccgcacccttatagaccagcaagttgtatacatccacccctccagcgct
ctgttcaaccgccagcctgaatgggttgtgtaccatgagttggtgctgactaccaaggag
tacatgcgggaggtgaccaccatcgaccctcgctggctggtggagttttcacctgccttc
ttcaaagtgtccgaccccacacgcctcagcaagcagaagaaacaacagcgcctcgagcct
ctgtacaaccgctacgaggaacccaacgcttggagaatctctcgtgccttcagacggcgt
tga
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