Enterobacter soli: Entas_0220
Help
Entry
Entas_0220 CDS
T01604
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
eas
Enterobacter soli
Pathway
eas03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
eas00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Entas_0220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eas03021
]
Entas_0220
03400 DNA repair and recombination proteins [BR:
eas03400
]
Entas_0220
Enzymes [BR:
eas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Entas_0220
Transcription machinery [BR:
eas03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Entas_0220
DNA repair and recombination proteins [BR:
eas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Entas_0220
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AEN62975
LinkDB
All DBs
Position
236155..240378
Genome browser
AA seq
1407 aa
AA seq
DB search
MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPTAHIWFLKSL
PSRIGLLLDMPLRDIERVLYFESYVVIEGGMTNLERNQILTEEQYLDALEEFGDEFDAKM
GAEAIQALLKSMDLEQECEQLREELNETNSETKRKKLTKRIKLLEAFVQSGNKPEWMILT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPY
LRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKMVEREEAVVWDILDEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA
RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTRDCVNAKGEGMVLTGPKEAERIYRAG
LASLHARVKVRITEYEKDENGEFVAKTSLKDTTVGRAILWMIVPKGLPFSIVNQALGKKA
ISKMLNTCYRILGLKPTVIFADQTMYTGFAYAARSGASVGIDDMVIPEKKHEIISEAEAE
VAEIQEQFQSGLVTAGERYNKVIDIWAAANDRVSKAMMDNLQTETVINRDGVEEQQVSFN
SIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVVTEDDCGTLEGITMTPVIEGGDVKEPLRDRVL
GRVTAEDILKPGTADILVPRNTLLHEHWCDLLEANSVDSVKVRSVVSCDTDFGVCAHCYG
RDLARGHIINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGSIKL
SNAKSVVNSAGKLVVTSRNTELKLIDEFGRTKESYKVPYGAVMAKGDGEQVAGGETVANW
DPHTMPVITEVSGFIRFTDMIDGQTITRQTDELTGLSSLVVLDSAERTTGGKDLRPALKI
VDAQGNDVLIPGTDMPAQYFLPGKAIVQLEDGIQIGAGDALARIPQESSGTKDITGGLPR
VADLFEARRPKEPAILAEISGIISFGKETKGKRRLVITPVDGSEPYEEMIPKWRQLNVFE
GERVERGDVVSDGPEAPHDILRLRGVHAVTRYITNEVQDVYRLQGVKINDKHIEVIVRQM
LRKATIENAGSSDFLEGEQVEYSRVKIANRDLEANGKIGATFARDLLGITKASLATESFI
SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRRAAGELPA
APQVTAEDASASLAELLNAGLGGSDNE
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagacttattaaagtttctgaaagcgcaaactaaaaccgaagagtttgatgcgatc
aaaattgctctggcttcgccagacatgatccgttcatggtctttcggtgaagttaaaaag
ccggaaaccatcaactaccgtacgttcaaacctgagcgtgacggccttttctgtgcgcgt
attttcgggccagtaaaagattacgagtgcctgtgcggtaagtacaagcgcctgaaacac
cgtggtgttatctgtgagaagtgcggcgttgaagtgacccagactaaagtgcgtcgtgag
cgcatgggccacatcgagctggcgtctccgactgcacacatctggttcctgaaatctctg
ccgtcccgtatcggtttgctgctggatatgccgctgcgtgatatcgaacgtgttctgtac
ttcgaatcttatgttgttatcgaaggcggtatgacaaatctggaacgtaaccagattctg
accgaagaacagtatctggacgcgctggaagagttcggtgacgaattcgacgcgaagatg
ggtgcggaagctatccaggccctgctgaagagcatggatctggagcaagagtgcgagcag
ctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgcaagaagctgaccaagcgt
atcaagctgctggaagcgttcgttcagtctggtaacaaaccagagtggatgatcctgacc
gttctgccggttctgccgccagatctgcgtccgctggttccgctggatggtggtcgtttc
gcaacgtccgatctgaacgatctgtatcgtcgcgtgatcaaccgtaacaaccgtctgaag
cgcctgctggatctggctgcgccagatatcatcgtacgcaacgaaaaacgtatgctgcag
gaagcggtcgatgccctgctggataacggtcgtcgcggtcgtgcgatcaccggttctaac
aaacgtcctctgaaatctttggccgacatgatcaaaggtaaacagggtcgtttccgtcag
aacctgctcggtaagcgtgttgactactccggtcgttctgtaatcaccgtaggtccatac
ctgcgtctgcatcagtgcggtctgccgaagaaaatggcactggagctgttcaaaccgttc
atctacggcaagctggaactgcgtggcctggccaccaccatcaaagccgctaagaaaatg
gttgagcgtgaagaagctgtcgtttgggatatcctggacgaagttatccgcgaacacccg
gtactgctgaaccgtgcaccaacactgcaccgtctgggtatccaggcatttgagccagta
ctgatcgaaggtaaagctatccagctgcacccgctggtttgtgcggcatataacgccgac
ttcgatggtgaccagatggctgttcacgtaccgctgacgctggaagcccagctcgaagcg
cgtgcgctgatgatgtctaccaacaacatcctgtctccagcgaacggtgaaccaatcatc
gttccttctcaggacgttgtattgggtctgtactacatgacccgtgactgtgttaacgcc
aaaggcgaaggcatggtgctgactggccctaaagaagctgagcgtatttaccgcgctggc
ctggcctctctgcatgcgcgcgttaaagtgcgtatcactgaatatgaaaaagatgaaaac
ggcgaattcgttgcgaaaaccagcctgaaagacacgaccgttggccgtgcgattctgtgg
atgatcgtaccgaaaggtctgcctttctccatcgtcaaccaggcgctgggcaagaaagca
atttccaaaatgctgaacacctgttaccgcattctgggcctgaagccgactgttatcttc
gctgaccagacaatgtacaccggctttgcctatgcagcgcgttcaggtgcatctgttggt
atcgatgacatggtcatcccagagaagaaacacgagatcatctctgaagcggaagctgaa
gttgctgagatccaggagcagttccagtctggtctggtaaccgcgggcgaacgctataac
aaagttatcgatatctgggctgcggcgaacgatcgtgtatccaaagcgatgatggacaac
ctgcaaaccgaaaccgttattaaccgtgacggcgtagaagagcagcaggtttccttcaac
agcatctacatgatggccgactccggtgcgcgtggttctgcggcacagattcgtcagctg
gcaggtatgcgtggtctgatggctaagccagatggctccatcatcgaaacgccaatcacc
gcgaacttccgtgaaggtctgaacgtactccagtacttcatctcaacccacggtgctcgt
aaaggtctggcggataccgcactgaaaactgcgaactccggttatctgacgcgtcgtctg
gttgacgttgcgcaggatctggttgttactgaagacgattgtggcacccttgaaggtatc
accatgaccccggttatcgagggtggtgatgttaaagagccactgcgcgatcgcgttctg
ggtcgtgttaccgcggaagacattctgaagccgggtaccgcagacattctggttccacgc
aacacgctgctgcacgagcactggtgtgacctgctggaagccaactctgttgactcagtg
aaagtgcgttccgttgtatcctgtgacaccgactttggtgtttgtgcgcactgctatggt
cgtgacctggcgcgtggccacatcatcaacaaaggtgaagcaatcggcgttatcgcggca
cagtcaatcggtgagccgggtacacagctgacgatgcgtacgttccacatcggtggtgcg
gcatctcgtgcggctgctgaatccagcatccaggtgaaaaacaaaggtagcatcaagctc
agcaacgcgaagtctgttgttaactccgcaggcaagctggttgtgacctctcgtaacacc
gagctgaagctgatcgacgaattcggtcgtaccaaagagagctataaagtgccttacggt
gctgttatggcgaaaggtgatggcgagcaggttgctggcggcgaaaccgtagcaaactgg
gatccacacaccatgccggttatcaccgaagtaagtggtttcatccgcttcactgacatg
atcgacggccagaccattactcgtcagaccgacgagctgaccggtctgtcttctctggtg
gttctggattctgctgaacgtactaccggtggtaaagatctgcgtcctgcactgaaaatc
gttgatgctcagggtaacgacgttctgatccctggcaccgatatgcctgcgcagtacttc
ctgccaggtaaagcgatcgttcagctggaagatggcattcagatcggcgcaggtgatgct
ctggcgcgtattcctcaggaatccagcggtaccaaggacatcaccggtggtctgccacgc
gttgcggatctgttcgaagcacgtcgtccgaaagagcctgcaatcctggctgaaatcagc
ggtatcatttccttcggtaaagagaccaaaggtaaacgccgtctggttatcaccccagta
gatggtagcgagccgtacgaagagatgattcctaagtggcgtcagctcaacgtgttcgaa
ggtgaacgtgtagaacgtggtgacgtggtttccgatggtccagaagctccgcacgacatt
ctgcgtcttcgtggcgtacacgcggtaacgcgttacatcaccaacgaagtacaggacgtt
taccgtctgcaaggcgttaagattaacgataagcacatcgaagttatcgttcgtcagatg
ctgcgtaaagcaaccatcgaaaacgcgggcagctccgacttcctggaaggcgagcaggtt
gaatactcacgcgttaagatcgctaaccgcgatctggaagcgaacggcaaaatcggtgcg
accttcgcacgtgatctgctgggtatcaccaaagcgtctctggcaaccgagtccttcatc
tccgcagcatcgttccaggaaactacacgtgtcctgaccgaagcggctgttgcgggtaaa
cgtgatgaactgcgcggtctgaaagagaacgttatcgtgggtcgtctgatcccggctggt
accggttatgcgtaccatcaggatcgtatgcgtcgtcgtgcagcgggcgaactgccagca
gcaccgcaggtcactgctgaagatgcatccgcgagcctggcagaactgctgaacgcaggt
ctgggtggttccgacaacgagtaa
DBGET
integrated database retrieval system
