Enterobacter soli: Entas_1648
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Entry
Entas_1648 CDS
T01604
Name
(GenBank) transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
eas
Enterobacter soli
Pathway
eas03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
eas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Entas_1648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eas03400
]
Entas_1648
Enzymes [BR:
eas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Entas_1648
DNA repair and recombination proteins [BR:
eas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
Entas_1648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRCF
DEAD
MFD_D3
UvrB_inter
Helicase_C
CarD_TRCF_RID
ResIII
UB2H
Cas3-like_C_2
ERCC3_RAD25_C
RecG_dom3_C
Motif
Other DBs
NCBI-ProteinID:
AEN64389
LinkDB
All DBs
Position
complement(1787785..1791231)
Genome browser
AA seq
1148 aa
AA seq
DB search
MPEHYRYSLPGKAGDQRQLGELTGAACATLVAEIAERHPGPVVLVAPDMQNALRLHDEIR
QFTDNLVFSLADWETLPYDSFSPHQEIISSRLSTLYQLPSMQRGVLIVPVNTLMQRVCPH
SYLHGHALVMKKGQRLSRDTLRAQLDSAGYRHVDQVMEHGEYATRGALLDLYPMGSDQPY
RLDFFDDEIDSLRVFDADTQRTLEEVESINLLPAHEFPTDKTAIELFRSQWRDKFDVKRD
AEHIYQQVSKGTLPTGIEYWQPLFFNEPLPALFSYFPANTLIVNTGDIDASASRFEGETR
ARYESRGVDPMRPLLPPEQLWLRSDELNTELKRWPRVQLKTDTLADKAANTNLAFQKLPD
LAVQAQQKSPLDSLRKFLESFTGPVIFSVESEGRREALGELLGRIKVAPKRIFRLDEATA
NGRYLMIGAAEHGFIDTLNNLALICESDLLGERVARRRQDSRRTINPDTLIRNLAELHPG
QPIVHLEHGVGRYQGMTTLEAGGIKGEYLMLTYANDAKLYVPVSSLHLISRYAGGAEENA
PLHKLGGDAWARARQKAAEKVRDVAAELLDIYAQRAAKEGYAFKHDKEQYQLFCDSFPFE
TTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVENNKQVAVLVPTTL
LAQQHYDNFRDRFANWPVRVEMLSRFRSAKEQTQILEQASEGKIDILIGTHKLLQSDVKW
KDLGLLIVDEEHRFGVRHKERIKAMRSDVDILTLTATPIPRTLNMAMSGMRDLSIIATPP
ARRLAVKTFVREYDSLVVREAILREVLRGGQVYYLFNDVENIQKAADKLAELVPEARIAI
GHGQMRERELERVMNDFHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLR
GRVGRSHHQAYAWLLTPHPKAMTTDAQKRLEAIASLEDLGAGFALATHDLEIRGAGELLG
EDQSGSMETIGFSLYMELLENAVDALKAGREPSLEDLTSQQTEVELRMPSLLPDDFIPDV
NTRLSFYKRIASAKSENELEEIKVELIDRFGLLPDAARNLLDIARLRQQAQKLGIRKLEG
NEKGGVIEFAEKNHVNPMWLIGLLQKQPQHFRLDGPTRLKFTQELAERKTRMDWVRNFMR
QLEENAIA
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacactaccgttattccttgcccggcaaagcgggcgaccaacgccagctgggt
gaactcacgggcgcggcgtgcgccacactggtggcagaaatcgcagagcggcatcccggc
ccggtggttcttgttgccccggatatgcaaaatgcactacgcctgcatgacgaaatccgc
cagttcaccgataacctggtcttcagcctggctgactgggaaacgctgccgtatgacagc
ttctccccgcaccaggagatcatctcctcacgcctgtccacgctctatcagttgccgtcc
atgcagcgcggcgtgctgattgtgccggtaaacaccctgatgcagcgcgtctgcccgcac
agctatttacatggtcatgcgctggtgatgaaaaaaggccagcgtctgtcgcgagatacc
ctgcgtgcacagcttgacagcgccggataccgccacgttgatcaggtgatggagcacggc
gaatacgccactcgcggcgccctgttggatctctacccgatgggcagcgaccagccttac
cgtctggactttttcgacgacgaaatcgacagcctgcgtgtctttgatgccgacacgcag
cgtacgctggaagaagttgaatccatcaacctgctgcctgctcacgaattcccgaccgac
aaaaccgccatcgagctgttccgcagccagtggcgcgacaagttcgacgtgaaacgcgat
gcggaacatatctatcagcaggtcagcaaaggcaccctgcctaccgggatcgaatactgg
cagcccctgttttttaacgagccattgcctgcgctgttcagctatttcccggccaatacg
ttgattgtaaacaccggggatatcgacgccagcgccagccgttttgaaggtgaaacccgc
gcccgctatgagagccgtggggttgacccgatgcgcccgttgctgccacccgaacagctg
tggctgcgtagcgatgagttaaatacagaacttaagcgctggccgcgtgtgcagctcaaa
acggacacccttgccgataaagccgcgaacactaacctcgctttccagaagctgcctgat
ttggccgtccaggcgcagcaaaaatcgccactggatagcctgcgcaagttccttgagtcc
tttaccgggccggtgattttctcggtagaaagtgaaggccgtcgcgaagcattaggcgag
ctgctcggtcgcattaaagtcgcccctaagcgtattttccgccttgatgaagccaccgcc
aacgggcgttacctgatgatcggcgccgccgagcacggttttattgatacgctcaataat
ctggccctgatttgcgaaagcgacctgctgggcgaacgtgtggctcgtcgtcgccaggat
agccgccgcaccattaacccggacacgcttatccgcaacctggcggagttgcacccgggg
cagcccattgttcaccttgagcacggtgttggtcgttatcaggggatgactacccttgaa
gcgggcggtattaagggtgaatacctgatgctgacctacgccaacgacgccaaactttac
gtgccggtttcgtcgctgcatctgattagccgttatgccgggggtgccgaagaaaacgcg
ccgctgcataaactgggcggtgatgcctgggcccgcgcgcgccagaaagccgccgaaaaa
gtgcgtgatgtggccgccgagctgctggacatttacgcccagcgcgcggccaaagaaggt
tacgcctttaagcatgataaagagcaatatcaactgttctgcgacagcttcccgtttgaa
accacgccggatcaggcccaggccatcaatgcggtgttgagcgatatgtgtcaaccgctg
gcgatggaccggctggtgtgcggtgacgtgggctttggtaaaaccgaagtggcgatgcgc
gcggcgtttttagccgtggagaacaacaagcaggttgccgtactggtgccaaccaccctt
ctcgcccagcagcattatgacaacttccgcgatcgcttcgccaactggccggtgcgtgtc
gaaatgctgtcccgtttccgcagcgccaaagagcagacacaaattctggagcaggcaagc
gaaggtaagatcgatattcttatcggcacccacaaactgctgcaaagcgacgtgaagtgg
aaagatttagggctgctgattgtcgatgaagagcaccgcttcggcgtgcgtcataaagag
cgtatcaaagcgatgcgttccgatgtcgatatcctgaccttaaccgccacgccaattccg
cgaaccctgaacatggcgatgagtggaatgcgcgatctgtcgattatcgccacaccaccg
gcgcgtcgcctggcggtgaaaaccttcgtacgcgagtacgatagcctggtggtacgcgaa
gccattctgcgtgaagtgctgcgcggcgggcaggtttactatctctttaacgatgttgaa
aacatccagaaagcggcagataaactggcggagctggttcccgaggcgcgtatcgccatc
gggcacgggcagatgcgtgaacgcgagctggaacgggtgatgaacgatttccaccaccag
cgttttaacgtgctggtttgtaccaccattattgaaaccggtatcgacatcccaacggcc
aacaccatcatcattgaacgcgcggatcactttggtctggcgcagctgcaccagctgcgt
ggccgggttgggcgctcacaccaccaggcctacgcctggctgctgacgccgcatccaaaa
gcgatgaccactgacgcgcaaaagcgtctggaagccatcgcctcactggaagatctgggt
gcagggtttgccctggccacccacgacctggagatccgcggtgccggtgaactgctgggt
gaagaccagagtggttccatggaaaccattggcttctcgctgtacatggaactgctggaa
aacgccgttgatgcgctcaaagccgggcgtgagccgtcactggaagatttgaccagccag
caaacggaagtcgagctgcggatgccgtccctgctgccggacgattttatcccggatgtg
aacacccgcctgtcgttctacaaacgcatagccagtgcgaaaagcgaaaacgagctggaa
gagatcaaagtggagcttattgaccgctttggcctgctgccggatgccgcgcgaaacttg
ctggatattgcccggctgcgccagcaggcacagaaactgggcattcgtaagctggaaggt
aatgaaaaaggtggcgtgattgagtttgccgagaagaatcacgtcaatccgatgtggctg
attggtttactgcaaaaacagccacagcatttccgcctggacgggccaacgcgcctgaag
ttcacccaggagcttgctgaacgtaaaacccgcatggactgggtgcgtaactttatgcgc
cagctggaagaaaacgcgatcgcctga
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