Exiguobacterium sp. AT1b: EAT1b_0134
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Entry
EAT1b_0134 CDS
T00897
Name
(GenBank) nucleic acid binding OB-fold tRNA/helicase-type
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
eat
Exiguobacterium sp. AT1b
Brite
KEGG Orthology (KO) [BR:
eat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eat03019
]
EAT1b_0134
Messenger RNA biogenesis [BR:
eat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EAT1b_0134
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GFIT
Motif
Pfam:
HD
Cas3_HD
TraI_2
YlqD
Motif
Other DBs
NCBI-ProteinID:
ACQ69068
UniProt:
C4L1C2
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All DBs
Position
106988..108166
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AA seq
392 aa
AA seq
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MNYYQQIDPVIDSSMNRDRFQIPQIEKSKERLDQLADGTPVQTKALVSTVEVREGKNGAK
WLQLSVTTANGMMRAKHWLRGNESELLPIYESGVIELSGKIDVYPKPDGAKSITIDRVHP
ISKDEAISLLPGLPGDETMEQFADELFSLIDTLSPTYQQIAYGLLDFVWDDFVLSPAALY
HHHNYAGGLLKHTVCMLRLGYRIQEQDDYLAMVFRVIKEAEQLHKVDLWNTMNGVKIEQA
YKGTFESLYAACEAMAERKEPLSWDELALGILFHDIGKIYEYSHLLSSPNRFEKLSPVEG
TSETTGISINPIGKLIGHMPYGGLLFEETLRHTSTRLPLDVHHRIWHMILSHHGKREWGS
SVLPMTTEAWMLHLIDLLDARYEKWARAHEDL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaactattatcaacaaattgatccagtcatcgattcatcaatgaaccgtgatcgattt
caaataccgcaaatagaaaaatcaaaggaacgtttagaccagttagccgatgggacccct
gtccaaacaaaagcgctcgtcagtacagtcgaggttagagaaggaaagaatggtgcgaaa
tggcttcaactaagtgttacgacggcgaacgggatgatgcgtgcgaagcattggctacgt
ggaaatgagagtgaactacttccaatctatgaatcgggtgtcatcgaattgtccgggaaa
atcgatgtctatccaaaaccggatggcgccaaatcgattaccattgaccgcgtccatcct
atctcaaaagatgaggcaatctcgttattaccaggcttgccaggggatgagacgatggag
cagtttgcggatgaattgttcagtttgattgatacgttgtcaccgacctatcaacagatc
gcctacggcctccttgatttcgtttgggatgatttcgtactatcgccagcggcactctac
caccatcataactatgcgggaggtctattaaagcataccgtgtgtatgcttcgtctcggt
tatcggattcaagagcaagatgactatttggcgatggtgtttcgtgtaataaaagaagcg
gagcagttgcacaaagtcgacctttggaatacgatgaacggtgttaaaatcgaacaggca
tacaaaggaacgtttgaatcgctgtatgccgcctgtgaagcgatggccgagcggaaagaa
ccgttgagttgggatgaactcgcacttggaatccttttccacgacatcggaaaaatatat
gaatacagccatctgttatctagtccgaatcgttttgaaaagttatctcccgttgagggc
acaagtgaaacgaccggcatctccatcaacccgattgggaaattgatcgggcatatgcca
tacggtgggctgttgtttgaagaaacgttacgccatacgtcgacgcgactgccattggat
gtccatcaccggatttggcacatgattttatcacatcatgggaaacgtgagtggggatcg
agtgtcctcccgatgacgacggaggcatggatgcttcacttgattgatttattggatgcg
cgttatgagaaatgggctcgcgcgcacgaagatttgtaa
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