Exiguobacterium sp. AT1b: EAT1b_0589
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Entry
EAT1b_0589 CDS
T00897
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
KO
K03086
RNA polymerase primary sigma factor
Organism
eat
Exiguobacterium sp. AT1b
Pathway
eat02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
eat00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
EAT1b_0589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eat03021
]
EAT1b_0589
Transcription machinery [BR:
eat03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EAT1b_0589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
DUF2316
DUF2408
Motif
Other DBs
NCBI-ProteinID:
ACQ69521
UniProt:
C4L3Z9
LinkDB
All DBs
Position
complement(539617..540711)
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AA seq
364 aa
AA seq
DB search
MAEKKKEDLFNAIEELEKLGKKKGVVSMQAIQDRLSHFEVDSDFIDNFIEDLEAKDIRVT
EDAADAEETPAKKEDEEVDLNDLSVPPGIKINDPVRMYLKEIGRVDLLSAKDETELAKRI
EQGDEEAKKRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVEKFDYMKGFKFS
TYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGREPSPEEIAKEME
LTPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQDAMAPQDAAAYELLKEQLEDVL
DTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRHPSRSKRLK
DFLD
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaagaagaaagaggatttatttaacgccatagaggaacttgaaaagttaggt
aagaaaaaaggcgtcgtctcaatgcaagcaatccaagatcgcctcagtcacttcgaggtg
gattcggatttcatcgataacttcatcgaagatttagaggctaaagacatccgcgtcaca
gaagatgcagcggacgcagaagaaacacctgcgaaaaaagaggatgaagaagtcgatttg
aacgacttatcagtacctcccggaatcaaaatcaacgacccagttcgaatgtatttgaaa
gaaatcggacgagtcgatctcctcagtgcgaaagatgagacagagctcgctaaacgaatc
gagcaaggggacgaggaagcgaagaaacgtctcgcagaagcgaacctacgtctcgtcgtg
tcgattgcgaagcgttatgtcggtcgtgggatgctcttccttgatttgattcaagaaggg
aacatgggacttattaaagcggtcgaaaaattcgactacatgaaagggttcaaattctcg
acgtatgcgacgtggtggattcgccaagcgatcacacgtgcgattgctgaccaagcccgt
acgattcgtattcctgtacacatggtggaaacaatcaacaaattgattcgtgtccaacgt
caattgcttcaagacctcggtcgcgaaccttctccggaagagattgccaaagagatggaa
ctcacacctgagaaggtccgtgaaattctaaagattgcccaagaacctgtttctttagaa
acaccgattggggaagaagacgactcacatctcggtgacttcatcgaagaccaagatgcg
atggctcctcaagatgcggcagcctatgaattgttgaaagagcaattagaagacgtacta
gatacgttgacagaccgtgaagagaacgtccttcgccttcgtttcggtctagatgacggc
cgcacacgcacactcgaagaagttggtaaagtattcggtgtcacacgtgagcggattcgt
caaatcgaagcgaaagcccttcgtaaattgcgtcatccgagtcgttccaaacgcttgaaa
gacttcctcgattaa
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integrated database retrieval system
