Exiguobacterium sp. AT1b: EAT1b_2366
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Entry
EAT1b_2366 CDS
T00897
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
eat
Exiguobacterium sp. AT1b
Pathway
eat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EAT1b_2366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eat03019
]
EAT1b_2366
03009 Ribosome biogenesis [BR:
eat03009
]
EAT1b_2366
Enzymes [BR:
eat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EAT1b_2366
Messenger RNA biogenesis [BR:
eat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EAT1b_2366
Ribosome biogenesis [BR:
eat03009
]
Prokaryotic type
rRNA helicases
EAT1b_2366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
AAA_19
CMS1
Flavi_DEAD
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ACQ71287
UniProt:
C4L313
LinkDB
All DBs
Position
2318138..2319667
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AA seq
509 aa
AA seq
DB search
MTKFQDLQLSEALVKGVHKMGFEEATPIQAETIPVALTGVDVLGQAQTGTGKTAAFGIPT
IERIDSKARQVQALVLAPTRELAIQVAEELNKIGETKRVYALPVYGGQQIDRQIRGLKKN
PQIVVATPGRLMDHMKRKTIKLDDIQTVILDEADEMLNMGFVEDIETILAGLPEERQTLL
FSATMPPQIKKIAERFMKSPTIIKVKAKEMTVENINQQFLELREGQKFDTLCRLIDIDSP
ELSIIFARTKKRVDEVTEALIKRGYTADGLHGDLTQSKRDQVIRRFKNGTIDILVATDVA
ARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGTALTFITPREFGQVKAIERVTN
KKMNRRHVPTIAEVLEGNQKQAAEELIERVQAGDFKAYTQLATELLEEYEAVEILAAALR
GLTKEPDSTPVEISYAEPVRVKRQGGRGGDRGGYRGRNDRRGGGGGRGGDRRGGRGGERR
DGRSGDRKGSFRGDDRRRSDDRGPRRPRD
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
ttgacaaaatttcaagacttacaattaagtgaagcattagtaaaaggtgtacacaaaatg
ggcttcgaggaagctacaccgatccaagctgagacaattcctgtcgcactcacgggagtg
gacgtattaggacaagcacaaacaggtacagggaaaacagcagctttcggtattccgaca
attgagcgaatcgattcaaaggcgcgtcaagtccaagcactcgttcttgcaccgacacgt
gaacttgcgattcaagttgcagaagaattaaacaaaatcggtgaaacgaaacgcgtatac
gcacttccagtatacggtggtcaacaaattgaccgtcagatccgtggtttgaaaaagaac
ccgcaaatcgtcgtagcgacaccaggacgtctcatggaccacatgaagcgtaagacaatc
aaactcgatgacattcaaacagtcatcttggatgaagcggatgaaatgctcaacatgggc
ttcgttgaagatatcgaaacgattttggctggtcttcctgaagagcgccaaacgcttcta
ttctcagcgacaatgccaccacaaatcaaaaagattgctgagcgcttcatgaagtcgccg
acaatcatcaaagtcaaagcgaaagaaatgacagttgagaacatcaaccagcaattcctc
gaattgcgtgaaggtcaaaaattcgatacactttgccgtttgattgacatcgattcacca
gaactcagcatcatcttcgctcgtacgaagaaacgtgtagatgaagtgacagaggcactc
atcaaacgcggatacactgcagacggtcttcacggagacttgacgcaatcaaaacgtgac
caagtcattcgtcgtttcaaaaacggaacaatcgatatcttggtagcgactgacgttgcg
gcacgtggacttgatatttcaggtgtcacacacgtttacaacttcgatgtaccacaagac
ccagaaagctacgtacaccgcatcggtcgtacaggtcgcgctggtaagactggtacagcc
ctcacgttcatcacgccacgtgaatttggacaagtgaaggcaatcgagcgtgtgacgaac
aagaagatgaaccgtcgtcacgtaccgacaatcgcggaagttcttgaaggaaaccaaaag
caagcagctgaagagttgatcgaacgcgttcaagcgggcgacttcaaagcttacacgcaa
cttgcgacagagcttcttgaagagtacgaggcagttgaaattctcgctgctgcccttcgt
ggattgacgaaagagccagattcaacacctgttgaaatctcgtacgctgaaccagttcgt
gtaaaacgccaaggtggtcgtggtggcgatcgcggtggataccgtggtcgtaacgaccgt
cgtggcggtggcggtggccgtggtggcgatcgtcgtggtggacgcggtggcgaacgtcgt
gatggacgcagtggagaccgtaaaggatcattccgtggtgacgatcgtcgtcgctcggat
gaccgtggtccacgccgtccgcgtgactaa
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