Exiguobacterium sp. AT1b: EAT1b_2975
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Entry
EAT1b_2975 CDS
T00897
Name
(GenBank) ATP-dependent DNA helicase, RecQ family
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
eat
Exiguobacterium sp. AT1b
Pathway
eat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EAT1b_2975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eat03019
]
EAT1b_2975
03400 DNA repair and recombination proteins [BR:
eat03400
]
EAT1b_2975
Enzymes [BR:
eat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EAT1b_2975
Messenger RNA biogenesis [BR:
eat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EAT1b_2975
DNA repair and recombination proteins [BR:
eat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EAT1b_2975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
TniB
AAA_30
RET_CLD1
Motif
Other DBs
NCBI-ProteinID:
ACQ71889
UniProt:
C4L6L0
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All DBs
Position
2939307..2940725
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AA seq
472 aa
AA seq
DB search
MYEATLKRVFGYESFRPGQRDIIHAVIEGQDVLAVMPTGAGKSLTFQLPSYIKNQGLTVI
VSPLLSLIEDQMLHIRERGERGVARLTSMESAEEKQDIINHLKRYRFLYLSPEQLAVPYV
TRALANVKIQMLVIDEAHCISQWGHEFRPEYARLGELRKQIGSPQCMAVTATAPEGVKQD
IIEKLALFSPEQFVHSANRPEIRLLVERLEKEKKLERLKELIREIPKPAVVYTATRREAE
ALAFELEDALFYHGGMSTEDRRLVQSQFLRDEVSVMVCTSAFGMGVNKDNVRSVVHFQLP
ATVEAYMQEIGRAGRDGQPAFAVLLYADGDERIQQFLIDGQYPKDEDMRLAYFERENGTS
IAQLPRLLRMNEEDPKFLLLKQLLTERSLQEALDWVKERKRDRYRQLGQMMDYALIRTCR
RDYLLRYFSEQTVDQEECCDVCGPIPFPDTPQIVRKNVTEWKIRLTQIFSFE
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
ttgtatgaagcgacattaaaacgagtgttcgggtatgaatcgtttcgccctgggcaacgc
gacatcatacatgccgtgatcgaagggcaggatgtattggccgtcatgccgacgggggcg
ggaaaatcgctgacgttccaacttccttcttatattaaaaatcaagggctcacggtgatt
gtctcgccattactctcactcattgaggaccagatgctgcatatacgagaacggggagag
cgtggtgtcgctcgtttgacgtcgatggaatcggctgaagagaagcaggacatcatcaac
catttgaaacgttaccgttttttatatctttcacctgaacaattggccgttccttatgtg
acgcgtgctctggcgaatgtgaaaattcaaatgctcgtcattgacgaggcgcactgtatc
tcacaatgggggcatgagttccgtcctgagtatgcgcgtttaggtgagttgcgaaaacag
attgggagtccccagtgtatggcggtcacggcgacggcgccagaaggcgtgaaacaggac
atcattgaaaagctggcactgttctcacctgaacaattcgtccactctgccaatcgtccg
gaaatccgattgttggttgaacggttggaaaaggagaagaaacttgagcgattgaaagag
ttgattcgagagattccaaaacctgcagtcgtttacacggcgacccgtcgcgaggcagag
gcgttagcctttgagctagaggatgcattgttttaccatggaggcatgtctacggaagac
aggcgactcgtgcagtcccagtttttacgggacgaagtgtcggtcatggtatgcacgagt
gcgttcgggatgggtgtgaacaaagacaacgtccgttctgtcgttcattttcagttgcca
gcaacagtcgaggcatacatgcaggaaatcggacgagcgggacgtgacgggcaacccgca
ttcgcggtccttctatatgccgatggcgacgaacgcatccagcaatttttaatcgacggg
cagtacccgaaagacgaggacatgcgactagcctactttgaacgtgagaacgggacgtca
atcgcgcaactaccaaggttgttacgcatgaatgaagaagacccgaagtttctcctgctg
aagcaattgttgacagaacgttcgcttcaagaagcactcgattgggtaaaggaaagaaag
cgtgatcggtatcgtcaactcggacagatgatggattatgccctcatccggacatgccgc
cgcgattacttgcttcgttatttttccgaacaaacggtcgaccaagaagaatgctgtgat
gtttgtgggccgattccgttccctgatacaccgcaaatcgtccgaaaaaatgtgacagaa
tggaaaattcggttgacgcaaatcttttcctttgaataa
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