Enterobacter asburiae L1: DI57_00895
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Entry
DI57_00895 CDS
T03084
Name
(GenBank) ssDNA exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
eau
Enterobacter asburiae L1
Pathway
eau03410
Base excision repair
eau03430
Mismatch repair
eau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DI57_00895
03430 Mismatch repair
DI57_00895
03440 Homologous recombination
DI57_00895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eau03400
]
DI57_00895
DNA repair and recombination proteins [BR:
eau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
DI57_00895
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DI57_00895
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DI57_00895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AHW92962
LinkDB
All DBs
Position
172270..174003
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AA seq
577 aa
AA seq
DB search
MKAPIKLRRREAVEPVDLPDDLPALLKRLYASRGVRRAEDLERSVKGMLPWQQLSGIEKA
TEMLYNALREGTRIVVVGDFDADGATSTALSVLSLRALGCDNVTYLVPNRFEDGYGLSPE
VVDQAHARGAQMIMTVDNGISSHAGVDHAHALGIPVLVTDHHLPGETLPDAEAIINPNLR
DCGFPSKSLAGVGVAFYLMLALRTLLRDKGWFDSRGIAVPNLAEYLDLVALGTVADVVPL
DTNNRILTWQGLSRIRAGKCRPGIKALLEIANRDPLKLAASDLGFALGPRLNAAGRLDDM
SVGVALLLCDNIGEARVLANELDALNQTRKEIEQGMQAEALTLCEKLERSGNTLPGGLAM
YHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGTLKGSGRSIQGLHMRDALERLDTLYP
GLMIKFGGHAMAAGLSLEEAKFDEFQRLFGELVTDWIDPALLQGEVVSDGELSPLEMTMD
VAQMLRDAGPWGQMFPEPLFDGRFRLLQQRIVGERHLKVMVEPVGGGPLLDGIAFNVDTA
VWPDNGVREVELAYKLDINEFRGNRTLQIIIDNIWPI
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagccccgataaaattgcgccgccgcgaggcggttgaaccggttgatttgccagac
gatctcccggcgttgcttaagcgcctctacgccagccgcggcgtgcgtcgcgctgaggat
cttgaacgcagcgtgaaagggatgctgccctggcagcagctgagcggtatcgaaaaagcc
actgaaatgctctacaacgcgcttcgtgagggaacgcggattgtggtggtaggcgatttc
gacgccgacggcgcaaccagcaccgcgctgagcgtgctcagcctgcgcgcgctgggctgc
gataacgtcacgtatctggtgccgaaccgttttgaagacggctacggcctcagtccggaa
gtggtcgatcaggcccacgcccgtggtgcacagatgatcatgaccgtcgataacgggatc
tcttcccatgcgggcgtcgatcatgctcacgctttggggatcccggtgctggtcaccgat
caccacctgccgggcgaaacgctgccggatgcggaagcgattattaaccccaacctgcgc
gactgcggtttcccatcgaaatctctcgcaggcgtgggcgtggcgttttatctgatgctg
gcgttacggaccctgctgcgcgataagggctggttcgactctcgcggtattgccgtacct
aacctggcagaatatctcgatctggtggcgctgggcaccgtcgcggacgtggtaccgctc
gatactaataaccgtattttgacctggcagggcctaagccgcattcgcgcgggcaagtgc
cgtccggggatcaaggcgctgctggagattgccaaccgcgatccgctcaagctggcggca
agcgatctgggctttgctctcgggccgcgtcttaacgcagccggaaggctggacgatatg
tccgtcggcgtggcgctgctgctgtgcgacaacatcggtgaagcacgcgtgctggccaac
gagctggacgcgctgaaccagacccgtaaagagattgagcaggggatgcaggccgaagcg
ctgaccctgtgcgaaaagcttgagcgcagcggcaatacgctgccgggcggcctggcgatg
taccatcccgagtggcatcagggcgtggtgggcattctggcgtcgcgcattaaagagcgt
ttccaccgtccggtgatcgcgttcgcccccgcgggtgacggcacgctgaaaggctctggt
cgctcaatccaggggctgcacatgcgcgacgcgctggagcgtctcgatacgctgtatccg
ggtctgatgatcaagttcggcggccatgcgatggcggcaggcctgtctctggaagaggcg
aagttcgacgagtttcagcgtctgtttggtgaactggtcaccgactggatcgacccggcc
ctgctgcagggggaagtggtatccgatggtgagctctcgccgcttgaaatgacgatggac
gtggcgcaaatgctgcgcgatgccggtccgtgggggcagatgttcccggaaccgctgttc
gacgggcgtttccgcctgctgcagcagcgtatcgtcggcgaacgtcatctgaaagtgatg
gtcgagcccgtgggcggtggaccgcttctggacggcatcgccttcaacgttgacacggcg
gtatggccggacaacggcgtgcgcgaggttgagctggcgtacaaactggacatcaacgag
tttcgcggtaaccgcaccctgcagatcatcatcgacaatatctggccaatttag
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