Enterobacter asburiae L1: DI57_08220
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Entry
DI57_08220 CDS
T03084
Name
(GenBank) ATP-dependent helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
eau
Enterobacter asburiae L1
Brite
KEGG Orthology (KO) [BR:
eau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eau03019
]
DI57_08220
Enzymes [BR:
eau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
DI57_08220
Messenger RNA biogenesis [BR:
eau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
DI57_08220
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3418
APHB_HrpA
OB_NTP_bind
Helicase_C
HA2_C
DEAD
WHD_HA2
AAA_19
AAA_22
T2SSE
nSTAND3
nSTAND_NTPase5
NACHT
DUF6145
ResIII
AAA_16
PhoH
SLFN-g3_helicase
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
AHW94358
LinkDB
All DBs
Position
complement(1755732..1759634)
Genome browser
AA seq
1300 aa
AA seq
DB search
MTEQQKLTFPMLLQQLDSLMLRDKQRFARRLHGVKKVKNPDAQQAIYQEMAKEIEQAAGK
VVLREAARPAITYPENLPVSQKKQDILEAVRDHQVVIVAGETGSGKTTQLPKICMELGRG
LKGLIGHTQPRRLAARTVANRIAEELQTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLA
EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSKH
FNNAPIIQVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELGNESAGDILIFMSGE
REIRDTADALSKRDLRHTEILPLYARLSNSEQNRVFQPHGGRRIVLATNVAETSLTVPGI
KYVIDPGTARISRYSYRTKVQRLPIEPVSQASANQRKGRCGRVSEGICIRLYSEDDFLSR
PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQ
ATVYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQA
SDEKHRRFHDKESDFLAFVNLWKYLGEQQKALSSNQFRRQCRVDFLNYLRVREWQDIYTQ
LRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDAEKQEYTGARNARFSIFPGSGL
FKKPPKWTMVAELVETSRLWGRIAARIDPEWVEPVAQHLLKRSYSEPHWERAQGTVMATE
KVTVYGLPVVAARKVNYSQIDPTLSRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELE
HKSRRRDILVDDEALFEFYDQRISHEVISARHFDSWWKKASKETPDLLNFEKSMLIKEGA
ESVSKLDYPNFWHQGNLKLRLTYQFEPGADADGVTVHIPLPLLNQVDEGGFEWQIPGLRR
ELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVTPLELPLLDALEREFRRMTGTTIDREDW
NWDQVPDHLKISFRVVDDKNKKLLEGRSLSELKESLKGKVQETLSAVADDGIEQSGLHIW
SFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQQQMMWRGLRRLLLLNIPS
PIKYLHEKLPNKAKLGLYFNPYGKVLDLIDDCISCGVDKLIHEAGGPVWTEEGFAQLHEK
VRAELNDTVVEIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDVKAQMAGLVYRGFVTG
NGFKRLGDTLRYLQAIEKRLEKMAIDPHRDRAQMLKVESVQQAWQQWLNKLPPARRDDED
VQAIRWMIEELRVSFFAQQLGTPYPISDKRILQAMEQISA
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgacagaacaacaaaaattaaccttcccgatgctcctgcaacagcttgattctctgatg
ctgcgcgataaacagcgctttgcccgccgtctgcacggcgtgaagaaggttaaaaatcct
gatgcacaacaggccatttaccaggagatggcgaaagagattgaacaggcggcagggaaa
gttgtgctgcgcgaagccgcgcgtccggcaattacctacccggaaaacctgcccgtcagc
cagaaaaaacaggacatccttgaggccgttcgcgaccaccaggtggtgattgttgcgggg
gaaaccggctcagggaaaaccacccagctgccgaaaatctgtatggagctgggacgcggg
ctaaaagggctgattggccacacccagccgcgtcgactggcggcgcgcaccgtggcgaac
cgtattgccgaagagctgcagacggagccgggcggctgcatcggttacaaggtgcgattc
agcgaccacgttagcgataacaccatggtcaagctgatgaccgatggtattctgctggcg
gaaatccagcaggatcgcctgctgatgcagtacgacaccatcatcattgacgaagcgcac
gagcgcagcctgaacatcgacttcctgctcggctacctgaaagagctgctgccgcgtcgt
ccggatctgaaaatcatcatcacctccgcgaccatcgaccctgagcgcttctcaaagcat
ttcaacaatgcgccgattatccaggtgtcaggacgcacgtatccggttgaagtgcgctat
cgcccgattgtggaagaggcggacgataccgagcgcgaccagctgcaggctatcttcgac
gccgttgacgagctgggcaacgaaagcgcgggcgacatcctgatcttcatgagcggcgag
cgcgaaatccgcgacaccgccgatgcgctcagcaagcgcgacctgcgccacacggagatc
ctgccgctttacgcgcgcctgtcaaacagcgagcagaaccgcgtattccagccgcacggc
gggcgacgtatcgttctggcgaccaacgtggcggaaacctcgctgaccgtgccggggatt
aaatacgttatcgacccgggcacggcgcgcatcagccgctacagctaccgcaccaaggtt
cagcggctgccgattgagccggtctcccaggcgtccgctaaccagcgtaagggccgctgc
gggcgagtgtcggaagggatctgtattcgtctttattccgaagatgatttcctgtcgcgt
ccggaatttaccgacccggaaattctgcgtaccaacctggcgtccgttatcctgcagatg
accgcgctggggctgggcgacatcgcggcgttcccgttcgtcgaagcgccggacaaacgc
aacattcaggacggcgtacgtttgctggaagagctcggcgccattaccaccgacgagcag
gcgacggtctacaagctgacgccgctgggccgccagctcagccagctgccggtggatccg
cgcctggcccgtatggtgctggaagcgcaaaagcacggctgcgtgcgcgaggcgatgatc
attacctcagcgctctccattcaggacccgcgcgagcgtccgatggacaaacagcaggcg
tctgacgaaaagcaccgtcgcttccacgacaaagagtccgacttcctcgccttcgtaaac
ctgtggaaatatctcggcgagcagcagaaagcgctctcctcgaaccagttccgccgccag
tgccgcgtggatttcctcaactacctgcgcgtgcgcgagtggcaggatatctacacccag
ctgcgccaggtggtgaaagagctgggcattccggtcaacagcgagccggcggagtaccgc
gagattcatatcgcgctgctgaccggcctgctgtcccacattgggatgaaggatgccgaa
aagcaggagtataccggcgcgcgcaacgcccgtttctccatcttcccgggttccggcctg
ttcaagaagccgccgaaatggaccatggtcgcggagctggtggaaaccagccgcctgtgg
gggcgcattgccgcgcgtatcgatccggaatgggtggagccggtggctcagcacctgctg
aaacgctcgtacagtgaaccgcactgggagcgcgcgcagggcacggtaatggcgaccgag
aaagtgaccgtttacggcctgccggtggtcgccgcgcgtaaggtcaactacagccagatc
gacccgacgctcagccgcgagctgtttatccgccacgcgctggtggagggagactggcag
acgcgtcacgccttcttccgcgaaaacctgaagctgcgcgccgaagtggaggagcttgag
cacaagtcccgccgccgcgacattctggtggacgacgaggcgctgtttgagttttacgac
cagcgcatcagccacgaggttatttccgctcgccattttgacagctggtggaagaaagcc
agcaaagagacgcctgacctgctcaacttcgaaaagagcatgctgattaaggaaggggcg
gagtcggtcagcaagctcgactacccgaacttctggcatcagggcaacctcaagctgcgg
ctgacctatcagtttgaaccgggtgccgacgcggatggcgtgaccgttcatattccgctg
ccgctgttaaaccaggtcgatgagggcgggtttgagtggcaaatccccggcctgcgccgc
gagctggtgattgcgctgatcaaatccctgccgaaaccggtgcgccgcaactttgtgcct
gcgccaaactatgcggaagcctttttgggccgcgtcacgccgctggagctgccgctgctg
gacgcgctggagcgtgagttccgccgcatgaccggcaccaccatcgaccgcgaggactgg
aactgggatcaggtgcccgatcacctgaaaatcagtttccgcgtggtggatgataaaaac
aaaaagctgctggaagggcgttcgctgagcgagctgaaagagtcgctgaaggggaaagtt
caggagacgctttctgcagtggcggacgacggtatcgagcagagcgggctgcatatctgg
agctttggtcagcttccggaaagctacgaacagaaacgcggtaactataaggttaaagcc
tggcctgcgctggtggacgagcgcgacagcgtggcgatcaaactgttcgataacccgctg
gaacagcagcagatgatgtggcgcgggctgcgtcgcctgctgctgctgaacatcccgtcg
ccgattaagtatctgcacgagaagctgccgaacaaagccaagctcgggctgtactttaac
ccgtacggcaaggtgctggatctgattgacgactgcatctcctgcggcgtggacaagctg
atccacgaggcgggcggtccggtctggacggaagagggctttgctcagcttcatgaaaag
gtgcgcgcggagctgaacgacaccgtggtggagattgccaagcaggtcgagcagatcctc
accgccgtgttcaatatcaacaagcgccttaaagggcgcgtggatatgaccatggcgctg
gggctgtcggacgtgaaggcgcagatggcggggctggtctatcgcggctttgtcaccggc
aacggctttaagcgcctgggcgatacgctgcgctacctgcaggcgatcgaaaaacgtctg
gagaagatggctatcgacccgcaccgcgatcgcgcgcagatgctgaaagtggagagcgtg
cagcaggcgtggcagcagtggctgaacaagctgccgccggcgcgccgcgacgatgaagac
gtgcaggcgatccgctggatgatcgaggagctgcgcgtcagcttctttgcccagcagctc
ggtacgccgtatccgatttcggataaacgtattctgcaggcaatggagcagatttccgct
taa
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