Enterobacter asburiae L1: DI57_17475
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Entry
DI57_17475 CDS
T03084
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
eau
Enterobacter asburiae L1
Pathway
eau03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
eau00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DI57_17475 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eau03021
]
DI57_17475 (rpoB)
03400 DNA repair and recombination proteins [BR:
eau03400
]
DI57_17475 (rpoB)
Enzymes [BR:
eau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DI57_17475 (rpoB)
Transcription machinery [BR:
eau03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DI57_17475 (rpoB)
DNA repair and recombination proteins [BR:
eau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DI57_17475 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
AHW96133
LinkDB
All DBs
Position
complement(3694780..3698808)
Genome browser
AA seq
1342 aa
AA seq
DB search
MVYSYTEKKRIRKDFGKRPQVLDIPYLLSIQLDSFQKFIEQDPEGQYGLEAAFRSVFPIQ
SYSGNSELQYVSYRLGEPVFDVQECQIRGVTYSAPLRVKLRLVIYEREAPEGTVKDIKEQ
EVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR
GSWLDFEFDPKDNLFVRIDRRRKLPATIILRALQYTTEQILDLFFEKVIFEIRDNKLQME
LVPERLRGETASFDIEADGKVYVEKGRRITARHIRQLEKDDIKLIEVPVEYIAGKVAAKD
YVDESTGELICPANMELSLDLLAKLSQSGHKRIETLFTNDLDHGAYISETIRVDPTTDRL
SALVEIYRMMRPGEPPTREAAESLFENLFFSEDRYDLSAVGRMKFNRSLLRDEIEGSGIL
SKDDIIEVMKKLIDIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS
LGDLDTLMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTR
ERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRKVTDGVVT
DEIHYLSAIEEGNYVIAQANSNLDDEGHFVEDLVTCRSKGESSLFSRDQVDYMDVSTQQV
VSVGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTAVAKR
GGTVQYVDASRIVIKVNEDEMYPGEAGIDIYNLTKYTRSNQNTCINQMPCVSLGEPVERG
DVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVS
RDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEK
LLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDL
SEELQILEAGLFSRIYAVLVAGGVEAEKLDKLPRDRWLELGLTDEEKQNQLEQLAEQYDE
LKHEFEKKLEAKRRKITQGDDLAPGVLKIVKVYLAVKRQIQPGDKMAGRHGNKGVISKIN
PIEDMPHDANGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGDKINAMLKQQEEVAK
LREFIQRAYDLGTDVRQKVDLNTFSDEEVLRLAENLKKGMPIATPVFDGAKEAEIKELLQ
LGGLPTSGQITLFDGRTGEQFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLG
GKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMP
ESFNVLLKEIRSLGINIELEDE
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atggtttactcctataccgagaaaaaacgtattcgtaaggattttggtaaacgtccacaa
gttctggacattccatatctcctttctatccagcttgactcgttccagaagtttatcgag
caagatcctgaagggcagtacggtctggaagcagccttccgctccgtgttcccgattcag
agctacagcggtaactccgagctgcagtacgtcagctaccgccttggcgaaccggtgttt
gacgttcaggaatgtcagatccgtggcgtgacctattccgcaccgctgcgcgtaaaactg
cgtctggtgatctacgagcgcgaagcgccggaaggcaccgtaaaagacattaaagaacaa
gaagtctacatgggtgaaattccactcatgacagacaacggtactttcgttatcaacggt
actgagcgtgttatcgtttcccagctgcatcgtagcccgggcgtcttcttcgacagcgat
aaaggtaaaacacactcttccggtaaagtactgtataacgcacgcatcattccttaccgt
ggttcatggctggacttcgagttcgatccgaaagacaacctgtttgtccgtatcgaccgt
cgtcgtaagctgcctgcaaccatcattctgcgtgcgctgcaatacaccactgaacagatc
ctggacctgttctttgagaaagtgatctttgaaatccgcgacaacaagctgcagatggag
ctggtgccggaacgtctgcgtggtgagaccgcatcgttcgacatcgaagccgacggcaaa
gtgtatgtggaaaaaggtcgccgtatcaccgcgcgccacatccgccagctggaaaaagat
gatatcaaactcatcgaagttccggttgagtacattgcaggaaaagtagccgcgaaagat
tacgttgacgagtcaacgggtgagctgatctgcccagcgaacatggagctgagcctggat
ctgctggctaagctgagccagtctggccacaaacgtatcgaaacgctgttcaccaacgat
ttggaccacggtgcgtatatctctgagactattcgcgtcgacccaaccaccgatcgtctg
agcgcgctggtagaaatctaccgcatgatgcgccctggtgagccaccaactcgcgaagcg
gcggaaagcctgttcgagaacctgttcttctccgaagaccgctacgatctgtccgcggtt
ggtcgtatgaagttcaaccgttctctgctgcgcgacgaaatcgaaggttccggtatcctg
agcaaagacgacatcatcgaagtgatgaagaagctcatcgatatccgtaacggtaaaggc
gaagtggacgatatcgaccacctcggcaaccgtcgtatccgttccgtaggcgaaatggcg
gaaaaccaattccgcgttggcctggtacgtgtagagcgtgcggtgaaagagcgtctgtct
ctgggcgatctggataccctgatgcctcaggatatgatcaacgccaagccgatttctgca
gcagtgaaagagttcttcggttcaagccagctgtctcagttcatggaccagaacaacccg
ctgtctgagattacgcacaaacgtcgtatctctgcactcggcccaggcggtctgacccgt
gaacgcgcaggctttgaagttcgagacgtacacccgacacactacggtcgcgtatgtcca
atcgaaacgcctgaaggtccaaacatcggtctgatcaactccctgtccgtgtacgcacag
actaacgaatacggtttcctcgagaccccgtaccgtaaagtgaccgacggtgttgtaacc
gacgaaattcactacctgtctgctatcgaagaaggcaactacgttatcgctcaggcgaac
tccaacctggatgacgaaggccactttgtagaagatctggttacctgccgtagcaaaggc
gaatccagcttgttcagccgcgaccaggttgactacatggacgtatccacccagcaggtg
gtatccgtcggtgcgtccctgatcccgttcctggaacacgatgacgccaaccgtgcattg
atgggtgcgaacatgcaacgtcaggccgttccaactctgcgcgctgataagccgctggtt
ggtaccggtatggaacgtgctgttgccgttgactccggtgttactgcggttgctaaacgt
ggcggtactgttcagtacgtcgatgcatcccgtatcgttatcaaagttaacgaagacgag
atgtatccgggcgaagcaggtatcgacatttataacctgaccaaatacacccgttctaac
cagaacacctgtatcaaccagatgccttgcgtatctctgggtgagccagttgagcgcggc
gacgtgctggcagacggtccgtccaccgacctcggtgaactggcgctcggtcagaacatg
cgcgtagcgttcatgccttggaacggttacaacttcgaagactccattctcgtctccgag
cgtgtggttcaggaagatcgtttcaccaccatccacattcaggaactggcatgtgtgtcc
cgtgacaccaagctggggccagaagagatcaccgctgacatccctaacgtgggtgaagct
gcgctctccaaactggatgaatccggtatcgtttacatcggtgcggaagtgaccggcggc
gacattctggttggtaaggttacacctaaaggtgaaacccagctgacgccagaagagaaa
ctgctgcgtgcaatcttcggtgagaaagcgtctgacgttaaagactcttctctgcgcgta
ccaaacggtgtttccggtacggttatcgatgttcaggtcttcacccgtgacggcgttgag
aaagataagcgtgcgctggaaatcgaagagatgcagctcaaacaggctaagaaagacctg
tctgaagaactgcagatcctcgaagcgggtctgttcagccgtatctatgcggtgctggtt
gccggtggcgttgaagctgagaagctcgacaaactgccacgcgatcgctggctggaactg
ggcctgaccgacgaagagaaacaaaatcagctggaacagctggctgagcagtatgacgaa
ctgaaacacgagttcgagaaaaaactcgaagcgaaacgccgcaaaatcactcagggcgac
gatctggcaccaggcgtgctgaagattgttaaggtgtatctggccgttaaacgtcagatc
cagcctggtgataagatggcaggtcgtcacggtaacaagggtgttatctctaagatcaac
ccgatcgaagatatgccgcacgatgctaacggtacgccggtagatatcgtactgaacccg
ctgggcgtaccgtctcgtatgaacatcggtcagatcctggaaactcacctgggtatggct
gcgaaaggtatcggcgacaagattaacgccatgctgaagcagcaggaagaagtcgcgaaa
ctgcgcgaattcatccagcgtgcctacgatctgggtaccgacgttcgtcagaaagtcgac
ctgaataccttcagtgatgaagaagtgctgcgcctggctgagaacctgaaaaaaggtatg
ccaatcgcaacgccagtcttcgatggtgcgaaagaagctgaaattaaagagctgctgcaa
ctgggtggtctgccaacgtctggtcagattacgctgtttgacggccgtaccggtgaacag
ttcgagcgtccggtaaccgtaggttacatgtacatgctgaaactgaaccacctggtcgac
gacaagatgcacgctcgttctaccggttcttacagcctggttactcagcagccgctgggt
ggtaaggcacagttcggtggtcagcgcttcggggagatggaagtgtgggcgctggaagca
tacggcgcggcatacaccctgcaggaaatgctcaccgttaagtctgatgacgtgaacggt
cgtaccaagatgtataaaaacatcgtggacggcaaccatcagatggagccgggcatgcca
gaatccttcaacgtactgttgaaagagattcgttcgctgggtatcaacatcgaactggaa
gacgagtaa
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integrated database retrieval system
