Enterobacter asburiae L1: DI57_19445
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Entry
DI57_19445 CDS
T03084
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
eau
Enterobacter asburiae L1
Pathway
eau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DI57_19445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eau03019
]
DI57_19445
03400 DNA repair and recombination proteins [BR:
eau03400
]
DI57_19445
Enzymes [BR:
eau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DI57_19445
Messenger RNA biogenesis [BR:
eau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DI57_19445
DNA repair and recombination proteins [BR:
eau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DI57_19445
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
AHW96504
LinkDB
All DBs
Position
4113208..4115037
Genome browser
AA seq
609 aa
AA seq
DB search
MAQAEVLNQESLAKQVLHETFGYQQFRPGQETIIETVLEGRDCLVVMPTGGGKSLCYQVP
ALVLNGLTVVVSPLISLMKDQVDQLLANGVAAACLNSTQTREQQQEVMAGCRTGQIRLLY
IAPERLMLDNFLDHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPELPFMAL
TATADDTTRLDIVRLLGLNDPYIQVSSFDRPNIRYMLMEKFKPLDQLLRYVQEQRGKSGI
IYCNSRAKVEDTAARLQNRGFSAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGLMDARKAL
STIYRVNQRFGMGYVVEVLRGANNQRIRDMGHDKLPVYGIGKEQSHEHWVSIIRQLIHLG
FATQNIAQHSALQLTEAARPVLRGDVELKLAVPRVIALKPRVMQKSYGGNYDRKLFAKLR
KLRKAIADEENIPPYVVFNDATLIEMAEQMPLSASEMLSVNGVGTRKLERFGKEFMALIR
SHADGDDEE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcaggcggaagtattgaatcaggagtcgctggctaaacaggttttgcatgaaacc
tttggctaccagcagttccgccccggccaggaaaccatcattgaaacggtgctggaaggt
cgtgattgcctggtggtgatgccgaccggcggcggtaagtccctctgttatcaggtgccc
gcgctggtgcttaacggcctgacggtcgtggtatcccctctcatttctctgatgaaagac
caggttgaccagctgctcgccaacggcgtggcggcagcctgtcttaactccacgcaaacc
cgggagcagcagcaagaggtgatggccgggtgccgcaccgggcagatccgcctgctgtat
atcgcgccggaacgcctgatgctggataacttcctcgatcacctggcgcactggaacccg
gtgctgctggcggtagatgaagcgcactgtatttcccagtggggacacgatttccgcccg
gaatacgctgccctcggccagctgcgtcagcgcttccccgagctgccgtttatggcgctt
accgccacggcggatgacaccacgcggctcgatatcgttcgcctgctcgggctgaacgac
ccctatattcaggtcagcagcttcgaccgcccaaacatccgctatatgctgatggaaaag
ttcaagccgctggatcagctcctgcgctacgtccaggagcagcgcggcaagtccggcatc
atctactgcaacagccgtgcgaaggtggaagacaccgccgcgcgtctgcaaaaccgcggc
tttagcgccgccgcgtatcatgccgggttagagaaccacatccgcgccgacgtgcaggaa
aaattccagcgtgacgacctgcaaatcgtcgtcgcgacggtggcgttcggaatgggcatt
aacaagcccaacgtgcgctttgtggtgcatttcgacatcccgcgcaatatcgaatcctac
taccaggaaaccggccgcgccgggcgtgacgggctgcctgcggaagcgatgctgttttac
gatccggccgatatggcgtggctgcgccgctgtctggaagagaaaccgcagggacagctg
caggatatcgagcgccacaagctcaacgcgatgggcgcgtttgccgaagcgcaaacctgc
cgtcgtctggtgctgctcaactactttggtgaagggcgccaggagccgtgcggcaactgc
gatatctgcctcgatccgccaaagcagtacgatggcctgatggacgcgcgtaaggcgctt
tcgaccatttaccgtgtgaatcaacgcttcgggatgggctacgtggtggaggtgctgcgc
ggcgccaataaccagcgtatccgcgatatgggccacgacaagctgccggtctacggtatt
ggcaaggagcagagccacgagcactgggtgagtatcattcgccagctgatccacctcggc
ttcgccacgcagaacattgcccagcattccgccctgcagctgaccgaggcggcgcgtccg
gtcctgcgcggagacgtcgaactcaagctcgccgtaccgcgcgtcatcgccctgaagccg
cgcgtgatgcagaaatcctacggcggcaactacgaccgcaagctgtttgccaaactgcgc
aagctgcgtaaagccatcgccgacgaagaaaacatcccgccttacgtggtgtttaacgac
gcgacgctgatcgagatggccgagcaaatgccgctcagcgccagcgagatgctcagcgtc
aacggcgtgggaacgcgcaagctggagcgcttcggtaaagagtttatggcgctcatccgc
tctcacgccgatggtgatgatgaggagtag
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