Exiguobacterium aurantiacum: NMQ00_05855
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Entry
NMQ00_05855 CDS
T08404
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
eaur
Exiguobacterium aurantiacum
Pathway
eaur03030
DNA replication
eaur03410
Base excision repair
eaur03420
Nucleotide excision repair
eaur03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eaur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NMQ00_05855 (polA)
03410 Base excision repair
NMQ00_05855 (polA)
03420 Nucleotide excision repair
NMQ00_05855 (polA)
03440 Homologous recombination
NMQ00_05855 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eaur03032
]
NMQ00_05855 (polA)
03400 DNA repair and recombination proteins [BR:
eaur03400
]
NMQ00_05855 (polA)
Enzymes [BR:
eaur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NMQ00_05855 (polA)
DNA replication proteins [BR:
eaur03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NMQ00_05855 (polA)
DNA repair and recombination proteins [BR:
eaur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NMQ00_05855 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NMQ00_05855 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
HHH_2
PIN_9
NRIP1_repr_3
Motif
Other DBs
NCBI-ProteinID:
UTT44020
LinkDB
All DBs
Position
1133478..1136075
Genome browser
AA seq
865 aa
AA seq
DB search
MNKLLLLDGNSLTYRAFFALPPMTDASGRNTNAVYGFTMMLLKLMEDEQPTHFAVAFDAS
KKTFRHDTYADYKGGRQKTPGELREQFPIVREICEAFGIKVLELDQYEADDIIGTLAKNT
AFDQVTVVTGDKDLLQLIDDRVTVYLTKRGITDVETMDAAAFKERYDGLNPLQMIDLKGL
MGDKSDNIPGIPGVGEKTALKLLTAYGSVEGLYEHTHELKGKQKEKVEANEREALMSKQL
ATIYTDVPIEIGMDELTFHPYDAGKVKPLFMSLQFKSLLGKLSLDASSEEAVEVRDVNHI
GIDEQDLTEAVLFLEQLRDDYFEEPVIGVAIASIAGVTVGDASLLDVPAVRDWLADESRA
TICLDAKQTIIQLKRHGISLRGYDDLLVAGYLLNLSGGTTLDSIAAHFEYALPEDEAVYG
KGAKLHVPEQDVLEQHLGEKAMAILTLFVNVSKELVQNEQTSLYEDLERPLASVLAEMEW
AGIHVDVSTLKVMEDDLRERLLQLETEIHSLAGEAFNINSPKQLGVILFEKLALPPVKKT
KTGYSTAADVLEKLAPLHPIVEHIMHYRELGKLQSTYVEGLQKVIKDDGKIHTRYTQTLT
QTGRLSSVNPNLQNIPIRLEEGRRIRKAFTASETDWMLYAVDYSQIELRIMAHMSQDEKM
LEAFLHDEDIHTSTAANVFRVAKEEVTSLMRRQAKAVNFGIIYGISDYGLSQNLGISRKE
AQTFIDTYFEQFPGVKRFMDAAIERAREHGYVETMLKRRRNIPDIHSRNFNLRGFAERTA
INTPIQGTAADIIKKAMIDVDVALRKSGLRSKLLLQVHDELIFEGPKEEMDALETLVKQA
MEHTITLDVPLRADGSFGETWFDTK
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgaataaactactacttcttgatggaaactcacttacgtatcgtgcgtttttcgcactg
cctccgatgacggatgcgagcggccgaaacacaaacgccgtgtacgggttcacgatgatg
ctgttaaagctgatggaagatgaacaaccgacgcacttcgcggtcgcattcgatgcgtcg
aagaagacgttccggcacgacacgtatgctgactataaaggcgggcgtcagaaaacccca
ggggaactccgtgaacagttcccaatcgtccgcgagatttgcgaggcgttcgggatcaaa
gtgctcgaactcgaccagtacgaggccgatgacatcatcgggacacttgcgaaaaatacc
gcgttcgaccaagtgaccgtcgtcaccggagataaagatttactacaactgattgatgac
cgcgtcaccgtctatttgacgaagcgtgggatcaccgatgtcgagacgatggacgcggcg
gcatttaaagagcgctatgacggtctgaacccgctccaaatgatcgatttaaaaggcctg
atgggtgataaatccgataacatcccgggcatccccggtgtcggtgagaagacggccctc
aaactgctcacggcctatggttccgtggaaggactgtatgaacatacgcatgaattaaaa
gggaaacaaaaagagaaagtcgaggcgaacgagcgggaagcgctcatgtcgaaacaattg
gcaacgatttataccgacgttccaatcgaaatcggcatggacgagctgacgttccatccg
tatgacgccggtaaagtgaaaccgctgtttatgagccttcagttcaagtcgcttctcgga
aaactgagcctcgacgcgtcgagcgaggaagccgtggaagtgcgtgatgtgaaccacatc
gggatcgacgagcaagatttgacggaagcggtcctcttcctcgaacaacttcgcgacgac
tatttcgaagaaccggtcatcggtgtggccattgcctcaatagccggggtgacggtcggc
gatgcgtcgctcttagacgtaccggctgtccgggattggttggccgacgagagccgggcc
acgatttgtctcgatgcgaagcagacgatcattcaattaaaacgccatggcatctcgctt
cgtggttatgacgacttgctcgttgccggatacttgctcaacctatcgggcggaacgaca
ctcgattcgattgccgcccatttcgaatacgcgttgccggaagacgaggcggtgtacgga
aaaggggcaaaactgcacgtgccggaacaagacgtgctcgagcaacatctcggggagaag
gcgatggccatcttgacgttgttcgtgaacgtcagcaaagagctcgtccaaaacgagcag
acgtcgctctatgaagatttggaacgtccgctcgcctcggtgctcgcggagatggaatgg
gccggcatccacgtcgacgtgtccacactgaaagtgatggaagacgatttgcgggaacgg
ttgcttcaactcgagacggaaattcacagtctcgcgggtgaggcgttcaatatcaattca
ccgaaacaactcggcgtcatcctgttcgagaagttggcgttgcctccggtgaagaagacg
aagaccggctactcgacggcagcagacgtgctcgagaaactcgcgccgctccatccgatc
gtcgaacatatcatgcattaccgtgaactcggcaagttgcaatcgacatacgtcgaaggg
ttacaaaaagtcatcaaagacgacgggaagatccacacccgctatacgcagacattgacc
cagaccggacggttgtcctcggtcaacccgaacttacagaacatcccgatccgattggaa
gaaggacgtcggatacgcaaggcgttcaccgcgagcgagaccgattggatgctgtatgcg
gtcgactactcgcaaatcgaactccggatcatggcgcatatgtcccaagatgagaagatg
ctcgaggcgttcctgcatgacgaggatatccatacgtcgacggcggccaatgtgttccgg
gttgccaaagaagaagtgacgtcgctcatgcgtcgtcaagcgaaagcggtcaacttcggc
atcatctatggcatcagcgactacggattgtcgcaaaacctcggcattagccgaaaagaa
gcgcagacgtttatcgatacgtacttcgaacagttcccgggcgtgaaacgattcatggat
gccgccatcgagcgggcacgggagcacggttacgtcgagacgatgctgaagcgtcgtcgc
aatatcccggacatccattcccggaacttcaacttgcgtggtttcgcggaacggacagcc
atcaacacgccgattcaagggacagccgccgatatcatcaaaaaagcgatgattgacgtc
gacgtggcgctccggaagtcgggccttcggtcaaaactattgcttcaagtccacgatgag
ctcatcttcgaaggaccaaaagaagaaatggatgcgctcgagacgctcgtgaaacaagcg
atggaacatacgatcaccttggacgtgcccctccgtgcggacggttcgtttggtgagaca
tggtttgatacgaaataa
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integrated database retrieval system
