Exiguobacterium aurantiacum: NMQ00_06020
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Entry
NMQ00_06020 CDS
T08404
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
eaur
Exiguobacterium aurantiacum
Pathway
eaur03030
DNA replication
eaur03430
Mismatch repair
eaur03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eaur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NMQ00_06020 (holA)
03430 Mismatch repair
NMQ00_06020 (holA)
03440 Homologous recombination
NMQ00_06020 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eaur03032
]
NMQ00_06020 (holA)
03400 DNA repair and recombination proteins [BR:
eaur03400
]
NMQ00_06020 (holA)
Enzymes [BR:
eaur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NMQ00_06020 (holA)
DNA replication proteins [BR:
eaur03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NMQ00_06020 (holA)
DNA repair and recombination proteins [BR:
eaur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NMQ00_06020 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
YqgF
TPR-S
Motif
Other DBs
NCBI-ProteinID:
UTT44460
LinkDB
All DBs
Position
1166183..1167193
Genome browser
AA seq
336 aa
AA seq
DB search
MCVLNEPWLHNGKLSNVYVLFGTEKYLLETWERAIIKAANPSGDQFDVMQLDLHETSLDT
ALDEAETVPFFSEYRTVIVKHAQFLTGAKEKQKQNVERLTEYVLQPAPYSVLVFVIEAEK
LDERKKVVKRLKERAIVLEAKKPSQSELMRYVGDELNRRSQKMERATVERLLFLCQDDWG
KLVRELEKLQLYASDGADIPIEIVNDLVPRTLEDNVFQLSEFLVARRADAALRLVRDLEK
QGQELIGLLSLLARQYRNMYLAKQLTEKGYGEKQIASKIGAHPYTVKLASQASRNFSEAQ
LGRSLTLIADADEAMKTGRGDKQVVFDTLVCQLTLL
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
gtgtgtgttttgaatgaaccgtggctgcataacggaaagttgtcaaacgtgtacgtcctg
tttgggacagagaaatatttgctagagacgtgggaacgggcgattatcaaagctgccaac
ccgtctggtgatcaatttgatgtgatgcagctcgatttacacgagacgtccctcgacacg
gcgctcgatgaagcagagacggtaccatttttcagcgaatatcggaccgtcatcgtcaaa
catgcccagtttttgacgggggcgaaagagaaacagaaacaaaacgttgagcgcttgacg
gaatacgtgttacaaccggcgccttactccgtgctcgtctttgtcatcgaagcagaaaaa
ctcgatgaacgaaaaaaagtcgtcaaacgcctgaaagaacgggccatcgtgctcgaagcg
aaaaaaccgagccagtccgaactgatgcgttacgtcggcgacgaattaaatcgtcgcagc
caaaagatggagcgggcaaccgtcgagcggctgttgttcctctgtcaggacgattgggga
aaactcgtgcgcgagcttgaaaaattacaactgtatgcgagcgacggggccgacatcccg
atcgaaatcgtcaacgatctggtcccgcggacactcgaggataacgtgttccagctgtcc
gaatttttagtggcccgtcgcgcggatgcggcacttcggctcgtccgggatttggagaag
caaggacaggagttgattggtctgttgtcgctcctcgcccgacagtatcggaatatgtat
ctcgccaaacagttgaccgagaaggggtatggcgagaaacaaatcgcctcgaaaatcggg
gcgcacccgtacacggtaaaactcgcctcacaagcgagtcggaatttctcggaggcccag
ctcggccgttcgctgacgttgatcgctgacgcggacgaggcgatgaagacgggacggggc
gacaaacaagtcgtcttcgatacgctcgtctgccaattgacattactgtga
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