Exiguobacterium aurantiacum: NMQ00_09315
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Entry
NMQ00_09315 CDS
T08404
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
eaur
Exiguobacterium aurantiacum
Pathway
eaur03030
DNA replication
eaur03430
Mismatch repair
eaur03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eaur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NMQ00_09315
03430 Mismatch repair
NMQ00_09315
03440 Homologous recombination
NMQ00_09315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eaur03032
]
NMQ00_09315
03400 DNA repair and recombination proteins [BR:
eaur03400
]
NMQ00_09315
Enzymes [BR:
eaur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NMQ00_09315
DNA replication proteins [BR:
eaur03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NMQ00_09315
DNA repair and recombination proteins [BR:
eaur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NMQ00_09315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
DNA_pol3_finger
PHP
DNA_pol3_a_NI
DNA_pol3_a_NII
HHH_6
tRNA_anti-codon
HHH_3
RNase_H_2
DEDDh_C
YhfH
Zn-ribbon_8
DUF2553
Motif
Other DBs
NCBI-ProteinID:
UTT41762
LinkDB
All DBs
Position
complement(1797075..1801367)
Genome browser
AA seq
1430 aa
AA seq
DB search
MEANQKMQLLLTDLGITTETDQFDGAELTRLVVNKQRRTWTFYFQLERVLPYEVYQLFMS
RIESRYATFADEVYARFTTTSGGGEQDYIDYWPRIVSELSQVSGAMRSYFASVSPRFEQN
KLLIPVRSAPEANYVDKELCQEVQALYSAYGFMKKPCQALFSENEEANQALREQVVQEDL
EQAKLALAAQFAKATETNDEPVTEVRMGALIKDEIVPIKTIIEEERRVAIRGLVFSAERK
ELKSGKKLFTFKMTDYTDSLIVKVFARDDDDDRMLSAVKKGMWIQAAGRVEDDSFMRELC
MMASQLQEVKVEPARDEWAGEKRVELHAHTQMSQMDAVTNVSALVARAAKWGHRAISITD
HAGVQSFPEAYYAGKKNDIKVLYGVEANVVNDGVPVAYHPTDVPLDDATYVVFDVETTGL
SAVYNKIIELAGVKIKDGEIIDRFEAFADPKHPLSATTIELTGITDDMVHGQPDPEVIAK
QFVDWCEDGILVAHNASFDMGFLEATLRSGGHEPDDYPVIDTLELARTILPTLKNHRLNT
LAKRFDIELTQHHRAIYDAEATAYLLMKLLELAKQMFEMQTHRSLNAKVGSDVSKIRPFH
ATIYAKTKKPGLRHLYELISLSHIDYLFRMARMPRSEIIKRREGLLIGSACDNGEIFDAA
LNKSDDELEKMMAFYDFIEIHPPALYMHLIDKEIVANELELREIIKRIIRVAGQAGLPVC
ATGNVHYLDRTDRSYREILIRTQGGANFINTRKELPHAHFRTTKEMMEEFKFLGDDLARE
IVITNPNAIADQIESIQIIPDDLYTPKIEGADDEVRNMSYDMARSIYGEELPEIVEARLE
KELKSIIGHGFAVIYLISHKLVKKSLDDGYLVGSRGSVGSSFVATMTEITEVNPLPPHYV
CPKCQHSHFFNDGSVGSGYDLPDKQCPECGTWYTKDGHDIPFETFLGFKGDKVPDIDLNF
SGEYQPHAHAYTKVLFGEEYVYRAGTIGTIADKTAYGYVKGYATENDKIYRNAEVDRLVS
GVTGVKRTSGQHPGGIIVVPDYMDIAEISPIQYPADDKSSEWKTTHFDFHSIHDNLLKLD
ILGHDDPTAIRMLQDLSGIDPKTIPTDDPTVMKIFSSPDVLGVTPEQIESKTGTLGIPEF
GTKFVRQMLEETKPATFSELVQISGLSHGTDVWIGNANELIYNGTCELKDVIGCRDDIMV
YLIYAGLEPSFAFKIMESVRKGKGLSEDMETEMRANDVPEWYISSCKKIKYMFPKAHATA
YVLMAVRIAYFKVHHPILYYATYFTVRAGDFDLSAMIKGSQAVRKAMSDIREKGFEATAK
DKGLHTVLELALEMLERGMKFQNIDLYRSSATEFLIEGNTLIPPFNAVDGLGTNAAKAIV
DARAEGQFLSKEDLRKRAKLSKTIVETLDTMKCLEGLPDENQLSFFDFGV
NT seq
4293 nt
NT seq
+upstream
nt +downstream
nt
gtggaagcaaatcaaaaaatgcaattgctcttgaccgacctcggcatcacgaccgagacg
gatcagttcgacggagcggagttgacacgacttgtcgtcaacaagcaacgccggacgtgg
acgttttatttccagctggaacgggtgttgccgtacgaagtgtatcaactgttcatgagt
cggatcgagagccgttacgcgacgttcgccgacgaggtatacgctcgtttcacgacgacg
tcaggcggcggcgaacaggactatatcgactattggccgcgcatcgtcagtgaactcagt
caagtgtcgggtgcgatgcgcagttatttcgcatcggtctcaccgcgctttgagcagaac
aaattgctcatcccggtacgctcggcccctgaggcgaactatgtcgataaagagctgtgc
caagaagtccaggcgctctatagcgcttatggcttcatgaagaaaccatgccaagcactg
ttctcggagaatgaagaagcgaaccaggcgctccgtgaacaagtcgtgcaagaagatttg
gaacaagcgaaactcgcgctcgcagcgcagttcgcgaaggcgaccgagacgaacgatgaa
ccggtcaccgaggtccggatgggtgccttgatcaaggacgagatcgtcccaatcaagacg
attatcgaagaagaacgacgtgtcgccatccgtggcctcgtcttctcggccgaacggaaa
gaactgaagagcgggaagaaactgttcacgttcaagatgaccgactatactgattcactc
atcgtcaaagtgttcgcacgcgatgacgacgatgatcggatgctcagcgccgtcaaaaaa
gggatgtggatccaagcggccggccgggtcgaggatgacagcttcatgcgcgaactgtgc
atgatggcatcgcaactgcaagaagtgaaagtcgagccggcccgtgacgaatgggcgggt
gaaaaacgcgtcgaactgcacgctcatacgcagatgagtcaaatggacgcggtcacgaac
gtgtcggcgctcgtcgcccgagcggcgaaatggggccatcgcgccatctccatcaccgat
cacgccggtgtccagtcgttcccggaggcgtattatgccgggaagaaaaatgatatcaaa
gtgttgtatggtgtcgaagcgaacgtcgtcaatgatggtgtcccggtcgcatatcacccg
accgatgtcccgctcgacgatgcgacatatgtcgtcttcgacgtcgagacgaccggactt
tcggcggtctacaacaaaatcatcgagctcgccggggtcaaaatcaaagacggcgagatc
atcgatcggttcgaggcgttcgcggacccgaaacatccgctctcggccacgacgatcgaa
ctgacgggcatcacggacgacatggtccatggccagcccgaccctgaagtcatcgccaag
cagttcgtcgactggtgcgaggacggcattctcgtcgcccacaacgcctcgttcgatatg
ggcttcttggaagcgacgcttcgaagcgggggccacgagccggatgactatccggtcatc
gatacgctcgagctcgcgcggacgattttgccgacgctcaagaaccaccgtctcaacacg
ctcgcaaaacgattcgatatcgagttgacccagcatcaccgggccatctatgatgccgag
gcgacggcgtacttgctcatgaaactgctcgaactcgccaaacagatgtttgagatgcag
acgcatcgctcgttgaacgcgaaagtcgggagtgacgtctcgaagattcgtccgttccat
gcgacgatttatgcgaagacgaaaaagccgggactgcgtcacttgtacgagttgatctcg
ttgtcccacatcgattacttgttccggatggcacggatgccacgttcggagattatcaaa
cggcgtgagggtctcctcatcggttcggcttgtgacaacggtgagatttttgatgccgcg
ctcaacaagtccgacgacgagcttgagaagatgatggcattctacgacttcatcgagatt
cacccgccggcgctctatatgcatctcatcgataaagagattgtcgccaacgagctcgag
ttgcgcgaaatcatcaagcggatcattcgcgtcgccggtcaagccggtctcccggtatgt
gcgaccggcaacgtccactaccttgaccggacggaccgctcgtaccgagagattttgatt
cggacgcaaggtggcgccaacttcatcaatacgcggaaagaactgccacacgcccatttc
cggacgacgaaagagatgatggaagaattcaagtttctcggtgacgacctcgctcgcgaa
atcgtcatcacgaacccgaatgcgatcgccgatcaaatcgagtcgatccaaatcatcccg
gacgacttgtacaccccgaagattgaaggcgcagacgacgaggtccggaacatgagttac
gacatggcccgttcaatctacggcgaagagttgcctgaaatcgtcgaggctcggctcgag
aaagagttgaagtcgattatcggtcacggctttgcggtcatctatttgatttcgcataaa
ctcgttaagaaatcgcttgacgacggctatctcgtcgggtcgcgtggttcggttgggtcg
agtttcgttgcgacgatgactgagatcaccgaggtcaatccgctgccgccgcattacgtc
tgtccgaagtgccagcattctcacttcttcaacgacggatcggtcgggtccgggtatgac
cttccggacaaacaatgtccggagtgcgggacgtggtatacgaaggacggtcacgatatc
ccgttcgagacgttcctcggcttcaaaggggataaagtcccggatatcgacttgaacttc
tcgggtgaatatcaaccgcacgcgcacgcctacacgaaagtgttgttcggtgaagagtat
gtgtatcgtgccggaacgatcgggacgatcgccgataagacggcgtacggatacgtgaaa
ggttatgcgaccgagaacgacaagatttatcggaatgccgaggtcgatcggctcgtctcg
ggtgtcaccggcgtcaaacgaacgtccgggcaacacccggggggaatcatcgtcgtaccg
gactatatggatatcgccgaaatctcgccgattcagtatccggccgatgataagtcgtcc
gaatggaagacgacccatttcgacttccactcgattcacgacaacttgctcaaactcgat
atcctcgggcacgatgacccgactgccatccgcatgctccaagacttgtccggcatcgac
ccgaagacgattccgacggacgatccgacggtcatgaaaatcttttcgtcgccggacgtg
ctcggtgtcacgccggagcaaatcgaatcgaagacgggaacactagggattccagagttc
gggacgaaattcgtccgacagatgcttgaagagacgaaaccggcgacattctccgagctc
gttcaaatctcgggactgtctcacgggacagacgtctggatcggcaacgccaacgagctc
atctataacgggacgtgtgaactgaaagacgtcatcgggtgtcgtgatgacatcatggtc
tacttgatttatgccggccttgaaccgtcattcgccttcaaaatcatggagtcggtacgg
aaagggaaaggcttgtcggaagacatggagacggagatgcgggccaacgatgtcccggaa
tggtacatctcgtcttgtaagaagatcaaatacatgttcccgaaagcgcacgccacggcg
tacgtgctcatggccgttcgcatcgcctacttcaaagtccatcatccgattttgtattat
gcgacgtacttcacggtccgggccggcgacttcgacttgtcggcgatgatcaaaggatca
caggccgtgcgtaaagcgatgtcggatatccgtgaaaaaggatttgaagccacggcgaaa
gacaaagggcttcacacggtgctcgagcttgcactcgagatgttagagcgcggtatgaag
ttccaaaacatcgatttgtatcgttcgagcgcgaccgagttcttgattgaagggaacacg
ctcatcccgccgttcaatgcggtcgatggcctcgggacgaacgcggcgaaagcaatcgtc
gatgcacgtgccgaaggacagttcttatcgaaagaagacttgcgcaaacgggccaagttg
tcgaagacgattgtcgagacgctcgatacgatgaaatgtctcgaaggcctaccggatgag
aaccaactctcgttctttgattttggggtgtaa
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integrated database retrieval system
