Exiguobacterium aurantiacum: NMQ00_10610
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Entry
NMQ00_10610 CDS
T08404
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
eaur
Exiguobacterium aurantiacum
Pathway
eaur03410
Base excision repair
eaur03430
Mismatch repair
eaur03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eaur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NMQ00_10610 (recJ)
03430 Mismatch repair
NMQ00_10610 (recJ)
03440 Homologous recombination
NMQ00_10610 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eaur03400
]
NMQ00_10610 (recJ)
DNA repair and recombination proteins [BR:
eaur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
NMQ00_10610 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NMQ00_10610 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NMQ00_10610 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
UTT42010
LinkDB
All DBs
Position
complement(2047663..2049954)
Genome browser
AA seq
763 aa
AA seq
DB search
MYHAKKRWVYPETDTTAVERLQTELNISEQLATLLIQRGHRDVEAAKAFLHVEDELTFHD
PYLFEQMNKVVDRLKRAADDGEMVLIYGDYDVDGVSASAVMWHALTEIGVMAECYIPNRF
TEGYGPNKEAFSWAAGEGFTLIITVDCGISGIEEATLLKELGVDLIITDHHEPKETLPDA
FAIIHPHIDPSYPYDKLAGAGVALKVAHAVLGRMPEELLDLAVLGTIADLVPLDGENRLL
AKLGLKALDDSKRPGILALREVCALTDGTLNEESVGFAFGPRINAAGRLDSAMPALQMLL
AESVEEALELAQKLDKQNKERQDIVKTIAKEATELVEASMTDDRVLVVASERWNPGVVGI
VASRLVEAYYRPVILLCHDPKTGKAKGSGRSIDGFDLFKELSQNEDILPHFGGHPAAAGM
TLLSENVAELRRRLNEQAESIPDETFVARVNVDLKLDVNDVSLDLIAEIGKLAPFGMGNP
SPRVVVADARLRDIRQIGRDNTHLKVQLAGDKRELDGIGFGYGHVVSEISKMANVSVMGS
LQVNEWNGMRKPQLMIQDIRVDGFQVFDYRGKKNSLDELKQLPGDTTSFISFQGRDDFPL
HDLDTPLKPFVVLLDLPDEEEVLADMLTEDVERIYCAFGQGGSFFEKLPTREDFRTYYVH
MATCERKNLRENLIRLSIERKWSKNTIQFMHQVFSELEFLVTMEDGLPGVNPEAPKRDLT
EAPCYKRRVGRVQLEERFIYASLAELKERLQSLRSNKMQEAYT
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgtatcatgcaaagaaacgatgggtgtatccggagacggatacgaccgcggttgaacgg
ctacagacagaactgaatatatcggagcagctcgcgacgctcctcatacaacggggacac
cgtgacgtcgaggcggcgaaggcgttcctgcacgtcgaggacgagctgacgttccacgat
ccttacttatttgaacagatgaacaaagtcgtcgaccgtttgaaacgtgcggccgatgac
ggggagatggtactcatctacggcgactatgacgtcgatggtgtcagcgcctcggccgtc
atgtggcacgccttgaccgagatcggtgtcatggcggagtgttacatcccgaaccggttc
acggaaggctacgggccgaacaaagaggcgttcagctgggcggcgggtgaagggttcacg
ctcatcatcacggtcgactgtgggatctccgggatcgaagaagcgacgctcttaaaagag
ctcggtgtcgatttgatcatcaccgaccaccacgagccgaaagagacgctcccagacgcg
ttcgccatcatccatcctcacatcgatccgtcgtatccgtatgacaaactcgccggggca
ggcgtcgcgctcaaagtggcccacgccgtgctcggccggatgccggaagagttgctcgac
ttggccgtgctcggtacgattgccgacctcgtcccgctcgacggggagaatcgtttgctc
gcgaagcttggactgaaggcgctcgacgattcgaaacgaccgggtattctcgcactccgc
gaagtatgcgccttgacggacgggacgttgaacgaggagtcggtcggttttgcgttcgga
ccacggatcaacgccgccggtcgtcttgattcggcgatgccagcactccagatgttgctc
gctgagagtgtcgaggaggcactcgaattggcccagaagctcgacaaacagaacaaagaa
cgtcaagacatcgtcaagacgatcgccaaggaagcgacagaacttgtcgaggcctcgatg
acggacgaccgtgtccttgtcgtcgccagcgaacgctggaatccaggcgttgtcgggatt
gtcgcgtcacgactcgtcgaggcgtactatcgcccggtcatcctattgtgtcatgacccg
aaaacggggaaggcgaaaggttcgggccgttcgatcgacggtttcgacttgttcaaagaa
ctatcacaaaatgaagacatcttgccgcacttcggtggacacccggccgcagccggaatg
acactgttatcggagaacgtcgccgaactgcgccgacgtctgaacgaacaagccgaatcg
attccagacgagacgttcgtcgctcgtgtcaatgtcgacttgaagctcgacgtgaacgac
gtatcgctcgatttgattgcagagatcgggaagctcgccccgttcgggatgggcaatccg
tcaccgcgcgtcgtcgtggcggacgcaagacttcgtgatatccgtcaaatcggacgtgac
aacacccatttgaaagttcaactcgccggggacaagagagaactcgacggcatcggcttc
ggctacggtcacgtcgtgtccgagatttcgaagatggccaacgtttcggtcatgggcagt
ctgcaagtgaatgaatggaacgggatgcgcaagccgcagctcatgattcaagatatccgt
gtcgacggattccaagtgttcgactaccggggcaagaaaaattcgctcgacgaattgaaa
cagcttccgggcgacacgacgtcgttcatttcgttccaaggacgggacgatttcccgctc
cacgacctcgatacgccgctcaagccgtttgtcgtcttgctcgatctaccggacgaggaa
gaggtgctcgcggacatgttgaccgaggatgtcgaacgcatctactgtgcgttcggacaa
ggcggttcgttcttcgagaagttgccgacgcgggaagatttccgaacatattacgtccat
atggcgacgtgcgaacggaaaaacctccgcgaaaacttgattcgtttgtcaatcgagcga
aaatggtcaaaaaatacgattcaatttatgcatcaagtattctctgaactcgaatttctt
gttacaatggaagacggactgcctggagtgaatccagaagcgccgaaacgcgatttgacc
gaagcgccgtgttacaagcgccgggtcggacgagtccaactcgaggagcgtttcatttat
gcgtcgttggcagaactgaaagagcggttacaatcattgcgatcgaacaagatgcaggag
gcttacacataa
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integrated database retrieval system
