Enterococcus avium: EH197_01375
Help
Entry
EH197_01375 CDS
T05982
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
eav
Enterococcus avium
Pathway
eav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EH197_01375 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eav03019
]
EH197_01375 (rny)
Messenger RNA biogenesis [BR:
eav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EH197_01375 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
ATP-synt_B
FAM222A
Motif
Other DBs
NCBI-ProteinID:
QCQ10897
LinkDB
All DBs
Position
177098..178654
Genome browser
AA seq
518 aa
AA seq
DB search
MLVPILLAIIGLIVGLGLGFMVAKARHEKEIDGAQNTARGIITHANKEAETLKKEALLEA
KEENQQYRAQVESELKESRQELKSQENRLLQREQTLDRKDDSLEKREHSLEEKETKISAR
QQLIDEREKDVEQLINEQQTKLEQVASLTKDEAKEVIMKRTEEELNHELTVMVKESEQRA
KEEADRKAKNLLAMAIQRCGADAVSETTVSVVTLPNDEMKGRIIGREGRNIRTLETLTGI
DLIIDDTPEAVVLSGFDPIRREIARMTLEKLIQDGRIHPARIEEMVEKSRKEMDERIREY
GEQAAFEVGAHTLHPDLIKILGRLHFRTSYGQNVLNHSIEVAKLTGVLAAELGENVQLAQ
RAGLLHDIGKALDHEIEGSHVEIGAELAAKYRENPVVINAIASHHGDTEATSVISVLVAA
ADAVSTARPGARSESLENYIRRLENLENISNSFDGVDSSFAVQAGREVRVMVKPEEISDL
DSVRLVRDIRRRIEDELDYPGHIKVVVIRETRATDYAK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgttagttcctattctcctcgctatcatcggtttaattgtcggtcttggtttgggtttc
atggtcgcaaaagcacgccatgaaaaagaaattgatggggcacaaaacacagctagaggg
atcattacgcatgcaaataaagaagcggaaaccttgaagaaagaagctttgttggaagcc
aaggaagaaaaccagcagtatcgcgcacaagttgaaagtgagttgaaagaaagcagacaa
gaattaaaatcacaagaaaatcgcttgcttcaaagagaacagactttagatcgtaaagat
gattctctagagaagcgtgagcactcactggaagaaaaagaaacaaagatcagtgctaga
cagcaattaattgacgagcgagaaaaagatgtagaacaactgattaatgaacaacaaaca
aaattggaacaggttgcttctttaacgaaggatgaagcgaaagaagtaattatgaagaga
accgaagaggaattgaaccatgagttaaccgttatggtcaaggaatctgagcaacgtgcc
aaggaagaagctgatcgcaaggcgaagaatcttttagcgatggcgattcaacgctgtggt
gctgatgctgtttctgaaacgactgtttcggtggttacattgccaaatgatgagatgaaa
ggtcgcatcattggacgtgaaggccgtaatattcgaacattagaaacattgacggggatc
gatttaattattgatgatacaccagaagcggttgttttatccggctttgatccaatcaga
cgggaaattgctcggatgacgttagagaaattgattcaagatggccggattcatccggca
cggatcgaagaaatggttgaaaaatctcgcaaagaaatggatgaacgtattcgcgaatac
ggggaacaagcggcctttgaagttggtgcgcataccctgcatccagatttgatcaagatt
ttaggtcgtttgcatttccgtaccagctatggtcaaaacgtgttgaatcactcaattgaa
gtagcgaaattaaccggtgtgttagctgcagaacttggtgaaaatgttcaattagcgcaa
cgcgcaggattgcttcatgatattggtaaagcactagaccacgagattgaagggtctcac
gttgaaattggcgctgaattagccgcgaaatatcgtgaaaatccggtcgtgattaatgca
attgcctctcaccatggagatacagaagcaacttcagtgatatctgttttagtagccgct
gccgatgcagtgtcaactgctcgaccaggtgcgcggagtgaatctttagaaaactatatc
cgtcgtttagaaaacttagaaaacatttcaaatagttttgatggagttgattctagcttc
gcagttcaagccggacgtgaagtacgtgttatggtcaaaccagaagaaatttctgatttg
gattctgttcgtttggttcgcgatatccgtcgcagaattgaagacgaattggattacccc
ggacatattaaagtagtggttattcgtgagacacgagcaaccgactatgcaaaataa
DBGET
integrated database retrieval system
