Enterococcus avium: EH197_07730
Help
Entry
EH197_07730 CDS
T05982
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
eav
Enterococcus avium
Pathway
eav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EH197_07730 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eav03019
]
EH197_07730 (pnp)
03016 Transfer RNA biogenesis [BR:
eav03016
]
EH197_07730 (pnp)
Enzymes [BR:
eav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
EH197_07730 (pnp)
Messenger RNA biogenesis [BR:
eav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EH197_07730 (pnp)
Transfer RNA biogenesis [BR:
eav03016
]
Prokaryotic type
tRNA degradation factors
EH197_07730 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
OB_RRP5_4th
KH-I_KHDC4-BBP
SPATA25
DUF3243
Motif
Other DBs
NCBI-ProteinID:
QCQ12080
LinkDB
All DBs
Position
1469919..1472042
Genome browser
AA seq
707 aa
AA seq
DB search
MSEKQVFKTTWGGRPLQVEIGQLAKQANGAVLVRYGDTVVLSAAVASKEAKDTDFFPLTI
NYEEKMYAVGKIPGGFIKREGRPSTDATLTARLIDRPIRPMFADGFRNEVQVTNFVMSVE
QDCSPAMAAMFGSSLALAISDIPFDGPIAGVDVGRVNGEYVLNPTVEQHAESDIDLTVAG
TKQAINMVESGAKEVSEEDMLGALLFGFDAIKEMVAFQAEIVAAVGKEKMEVSLLQVDPE
LKKEIFDGYYQTMKTAVMTMDKLAREDEIEKVKETVKEVYAEKFADHEDEAQLTKEVKQI
AEDLEKDVVRELITIDKIRPDGRKLDEIRPLAAETGILPRVHGSGLFTRGQTQALSACTL
APLGEHQIIDGLGTVESKRFIHHYNFPQFSVGSTGRAGSPGRREIGHGALGERALAQIIP
SEEDFPYTIRLVAEVLESNGSSSQASICAGTLALMDAGVPIKAPVAGIAMGLVSDGENYT
ILTDIQGLEDHLGDMDFKVAGTKDGITALQMDIKIQGITEQILSEALTQAKQARMEILEV
LTDTIAEPRKELSPYAPKIEMIQIDPDKIKTVIGKGGDTINGIIEETGVKIDIDQEGNVS
IASSDADMIKKAIKIIEELTKEVKVGEVYLGKVVRIEKFGAFVNLIKGKDALVHISQLAN
ERVNKVEDVVKLGDEVLVKVTEIDRQGRVNASRKALLKEEESKKAEK
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaaacaagttttcaaaaccacttggggcggacgccctttgcaagttgaaatc
ggtcaacttgctaaacaagccaatggcgcagttttagttcgctatggcgacacagtcgta
ttgagtgcagctgttgcctcaaaagaagcaaaagataccgactttttcccattaaccatt
aactatgaagaaaaaatgtatgcagtgggtaaaatccctggcggcttcattaaacgtgaa
ggtcgtccaagtacagacgcaaccttgactgcccgtttaattgaccgtccgattcgtccg
atgtttgcagatggattccgtaatgaagtccaagtaacgaactttgtgatgagtgtagaa
caggattgctctccagcaatggcagcgatgtttggttcttcgttggctctagccatttca
gatattccgtttgacggaccaatcgctggtgtcgatgtgggtcgcgtgaatggtgaatat
gtattgaatccgactgtcgaacaacatgctgaatcagatatcgatttaacagttgctggg
accaaacaagccattaacatggtagaatctggcgccaaagaagtttctgaagaagacatg
cttggcgcattactattcggatttgatgcaatcaaagaaatggtggctttccaagctgag
atcgtagctgcagtcggcaaagagaaaatggaagtttctttattacaagttgatcctgaa
ctgaaaaaagaaatttttgacggctactatcaaacaatgaaaacagctgtaatgacaatg
gataaattggcacgtgaagacgaaatcgaaaaagtcaaagaaacggtcaaagaagtttac
gctgaaaaatttgcggatcatgaagatgaagcgcaattaacaaaagaagtaaaacaaatc
gcggaagatcttgaaaaagatgtggttcgcgaattgattacaatcgataaaattcgccca
gacggacgtaaattagatgaaattcgtccgttggctgctgaaacaggtattttaccacgt
gttcatgggtcaggcttatttacacggggacaaacacaagcattatctgcttgtactttg
gcacccttaggtgaacatcaaatcattgatggtttaggaacagttgaaagtaaacgattc
atccatcattacaacttcccgcaattctctgttggttctactggacgtgctggttcacca
ggtcgtcgtgaaattggccatggagcattgggtgaacgtgcattagcccaaattattcca
agcgaagaagatttcccttacaccatccgtttagtagcggaagtattggaatcaaacggt
tcttcttctcaagcaagtatctgtgctggtacattggcgttaatggatgctggtgtgcca
atcaaagcaccagttgctggtatcgcaatgggcttggtttccgatggtgaaaactatacg
atcttgacagatatccaaggattggaagaccatcttggcgatatggactttaaagttgct
ggtacaaaagatggaatcacagctttgcaaatggatatcaaaatccaaggaattactgaa
caaattctttctgaagcattaacgcaagcaaaacaagcgcggatggaaatcttagaagtc
ctaactgatacgattgctgagccacgtaaagaattaagcccatacgcaccgaagatcgaa
atgatccaaatcgatccagataagatcaaaacagtcatcggtaaaggcggagacacaatc
aatggtatcatcgaagaaactggtgtaaaaattgatattgatcaagagggtaacgttagc
attgcttcttctgatgcagatatgatcaaaaaagcgattaagatcattgaagagttaact
aaggaagtcaaagtcggcgaagtgtacttaggaaaagttgttcgtatcgagaaatttgga
gcctttgtaaacttgattaagggcaaagatgcattggttcacatttcacaacttgcaaat
gagcgcgtgaataaagtggaagatgtcgtaaaattaggcgatgaagtattagtaaaagtg
acagaaatcgatcgtcaaggtcgtgtaaatgcttctcgtaaagccttattgaaggaagaa
gaaagcaaaaaagcagaaaaataa
DBGET
integrated database retrieval system
