Enterococcus avium: EH197_08125
Help
Entry
EH197_08125 CDS
T05982
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
eav
Enterococcus avium
Pathway
eav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EH197_08125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eav03019
]
EH197_08125
03009 Ribosome biogenesis [BR:
eav03009
]
EH197_08125
Enzymes [BR:
eav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EH197_08125
Messenger RNA biogenesis [BR:
eav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EH197_08125
Ribosome biogenesis [BR:
eav03009
]
Prokaryotic type
rRNA helicases
EH197_08125
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
DeaD_dimer
NAT10_TcmA_helicase
CMS1
Motif
Other DBs
NCBI-ProteinID:
QCQ12156
LinkDB
All DBs
Position
1540251..1541801
Genome browser
AA seq
516 aa
AA seq
DB search
MKFKELKLAPELLVAIERSGFEEATPIQEQTIPLALEGKDVIGQAQTGTGKTAAFGLPML
NKIDTTKNVLQGLVIAPTRELAIQTQEELFRLGRDKKIRVQAVYGGADIGRQIRGLKDRP
HIVVGTPGRMLDHINRHTLKLETVETLVLDEADEMLNMGFLEDIEKIISKVPAERQTLLF
SATMPDAIKKIGVKFMKTPEHVKIKAKEMTADLIDQYYVRAKDYEKFDVMTRLFDVQTPD
LAIVFGRTKRRVDELARGLEARGYKAEGIHGDLSQQKRMSVLRSFKRGDLDILVATDVAA
RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKGGMSVTFVTPNEMGYLHVIENLTKK
RMNPMRPPTEKEAFKGQLGAAMEQIQNQMEENSDSLEKYNESAKELLAAYSPEELAALLL
KTTAKDPADAVPVKITPERPLPSNKKGGFNRGGKRGGGNNRGGGRGKDNYRKDRGGDRDR
NKNKNYGGNKSRSNNKNTNRSNDKKRGFVIRTNSND
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
ttgaaattcaaagaactaaaattagcaccagaactattagtcgcaatcgagcgctcaggt
tttgaagaagcaacgccaatccaagagcaaacaattccattagctttagaaggaaaagat
gtaatcggacaagcacaaacaggtacaggtaaaacggctgcttttggcttaccgatgctg
aacaagatcgacacaacgaaaaatgtattacaaggacttgtcatcgcaccaacacgtgag
cttgcgatccaaacacaagaagaactgtttcgcttaggccgcgataaaaaaattcgcgta
caagctgtttatggcggagcagatattggtcgtcaaatccgcggtttgaaggaccgtccg
catatcgttgtcggaacaccaggccggatgttggatcatattaatcgccacaccttgaaa
ctagaaactgtggaaacattagtcttggatgaagcggacgaaatgttgaacatgggcttc
ttagaagatatcgaaaaaattatcagtaaagtccctgcagaacgccaaacattgttgttt
tcagcaacaatgcctgatgcaattaaaaaaatcggcgtgaagtttatgaaaactccagag
cacgtgaagattaaagctaaagaaatgacggctgatttgattgatcaatattacgttcga
gcaaaagattacgaaaaatttgatgttatgacacgtttgtttgatgttcaaacaccagat
ttagccatcgtctttggtcggacaaaacgacgtgttgatgaattggctcgtggcctagaa
gctcgcggctataaagctgaaggtatccacggtgatttatcacaacaaaaacggatgagc
gttttgcgttcattcaaacgtggtgatttggatattttagtagcgacagacgttgctgct
cgcggcttggatatctcaggtgttacccatgtgtacaactatgatattccgcaagatcca
gaaagctacgttcaccgtatcggccgtacaggtcgtgctggtaaaggtgggatgtctgta
acgtttgttacaccaaacgaaatgggctacttgcatgtgatcgaaaacttaacgaaaaaa
cgcatgaacccaatgcgtccaccaaccgaaaaagaagcctttaaaggtcaactaggcgct
gcaatggaacaaattcaaaatcaaatggaggaaaattccgacagcctagaaaaatacaac
gaatcagcaaaagaattattagctgcttattcaccagaagaactggctgctttattattg
aagactacagccaaagatcctgctgatgcggttcctgtaaaaattacgcctgaacgtcca
ttaccttcaaataaaaaaggcggtttcaatcgtggcggcaaacgcggcggtggaaataac
cgtggcggcggacgtggaaaagacaactaccgtaaagaccgcggtggtgatcgtgatcgt
aacaaaaataaaaattacggcggtaataaatcacgtagcaacaataaaaatacgaaccgc
agcaatgataaaaaacgcggattcgttattcgcactaactcaaacgattag
DBGET
integrated database retrieval system
