Enterococcus avium: EH197_13740
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Entry
EH197_13740 CDS
T05982
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
eav
Enterococcus avium
Pathway
eav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EH197_13740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eav03021
]
EH197_13740
03019 Messenger RNA biogenesis [BR:
eav03019
]
EH197_13740
Transcription machinery [BR:
eav03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
EH197_13740
Messenger RNA biogenesis [BR:
eav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EH197_13740
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Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
Spore_III_AA
AAA_22
AAA
Motif
Other DBs
NCBI-ProteinID:
QCQ13189
UniProt:
A0A2N8PWI7
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All DBs
Position
2684243..2685538
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AA seq
431 aa
AA seq
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MSDYLTMAELENKTLKEIYAYAKDFKIPYYSQMNKKELSLAVIRAQAEKQGFFYMEGVLD
IVGQDGYGFLRPINYGSSAEDIYISSSQIRRFGLRNGDKVAGKARPPKESERYYGLMHVE
SVNGKDPEEAKERPHFPALTALYPEKQLVLETTPGRLSTRMIDIFSPVGFGQRGLIVAPP
KAGKTTILKEIANGITDNYPDVELIVLLIDERPEEVTDLERSVKGDVVYSTFDQQPQNHT
RVSELVLERAMRLVEDKRDVVILMDSITRLARAYNLVVPPSGRTLSGGIDPAALYKPKKF
FGAARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNLELQLSRELSERRIFPAIDI
KKSGTRKEELLMAPSRLEEIFKLRNNMTGDSLEYTSQFVNFLKKTKNNDQVFKAFKDVSF
GGKTVRRNQKR
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattatttaacaatggcggaacttgaaaacaagacgctaaaagaaatttatgct
tatgcaaaagactttaaaattccttattatagtcaaatgaacaaaaaggaattatcgctg
gctgtgattcgagcacaggcagaaaaacaaggcttcttttatatggaaggtgtcttggat
attgttggacaagacggttacggctttttgcgtccgatcaattatggatcaagtgcggaa
gatatctatatttcttcctcacagattcgtcgttttggtttgcgaaatggagacaaagtg
gcgggaaaagctcgtccgccaaaagaatcagagcgttattatggtttgatgcatgtggaa
agtgttaatggtaaagatccagaagaagccaaagaacgtccgcatttccctgcattaaca
gctctttatcctgagaaacaattagttttagaaacaactcccggtcgtttgtctacacga
atgatcgacatcttctcaccggtaggatttggtcaacgtggcttaatcgttgcaccgcct
aaagccggaaaaacaacaatccttaaagaaatcgccaatggtattactgataactatccc
gatgtggaactgattgttctcttaattgacgaacgtccagaagaagtgacggacttagaa
cgcagcgtgaagggcgatgtggtttattcaacctttgatcaacagccacaaaatcatact
cgggtatccgaattagtcttagaacgcgcgatgcgtttagtcgaagataagcgtgatgta
gtcattttgatggatagtatcactcggttggctcgtgcttataacttagtcgttccccca
agcggtcggacattaagcggcgggatcgatccagctgcgttatataagccaaagaaattc
tttggtgccgctcgtaatattgaagaaggcggaagtttaacgattttagcaactgcgtta
gttgataccggtagccggatggatgatgtcatctatgaagagttcaagggaaccgggaac
ctagaattacaattatctcgagaattatccgaacgtcgaatcttccctgccattgacatc
aagaaatcaggtacacgtaaagaagaattattaatggcaccatctcgtttggaggaaatc
tttaagctacgtaataatatgactggcgactccttagaatatacgtcacaatttgttaat
ttcttgaaaaagacaaagaataacgaccaagttttcaaagctttcaaagatgtttcattc
gggggaaaaaccgtgcgaagaaatcaaaaaagataa
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