Enterococcus avium: EH197_14185
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Entry
EH197_14185 CDS
T05982
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
eav
Enterococcus avium
Pathway
eav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EH197_14185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eav03019
]
EH197_14185
03400 DNA repair and recombination proteins [BR:
eav03400
]
EH197_14185
Enzymes [BR:
eav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EH197_14185
Messenger RNA biogenesis [BR:
eav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EH197_14185
DNA repair and recombination proteins [BR:
eav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EH197_14185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
BCL9
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QCQ13274
LinkDB
All DBs
Position
2772147..2773541
Genome browser
AA seq
464 aa
AA seq
DB search
MDLTQLLREKFHHDQFRPGQQEIIETILNGESVLGMLPTGTGKSLCYQLPGYLIDGTVII
ISPLISLMEDQVAQLQRLGEKRAVALNSLLSSWEKQWILSEIHHYKFIFMSPEMFLSSEV
QKALQAARLALIVVDEAHCISQWGIDFRPEYLKIADGIKFIGGPLVLALTATATPAVRMD
IQRLLFRENQAKEFIFSVDRPNISYFVYQKTKLEKLQELITTLEGSGIIYCATRKKVEEL
YQTFKHQHAIAYYHGGLSGQERRMLQQQFLADDLRILIATNAFGMGINKENIRFVIHYDL
PDSPENYLQEVGRAGRDGQPSQAILLYEAGDEYIHHFLQEQTDQSKKLFEIKQRMTDLVF
EDPLIKKWEQFFPNESSRLMDLLSQRGKTKKIQLQKMLDYISTKECRRAFLIAYFGETSA
GENHNCCDNDGALLKAKPVKQLNSEAHLSWEKIIQKIFKNDEKD
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggacttaacacaattattaagagaaaaatttcatcatgatcagttcagacctggccag
caggaaattattgagacgatcctaaatggagaatcagtgttaggaatgttgccgacagga
actggcaaatcattgtgttatcaactgcctggttatttaatagatgggacagtaatcatt
atttcaccgcttatttctttaatggaggaccaagtagctcagttacagcgacttggcgaa
aaaagagctgtggcgctcaatagcttgctttcttcttgggagaagcaatggattttaagt
gaaattcaccattataaatttattttcatgagtccagaaatgtttttgagtagcgaggtc
caaaaggctttacaggctgcaagattagcgttgatcgtggtggatgaagctcattgtatc
tctcagtggggaatcgattttcgaccagaatatctgaaaatagccgatggtattaaattc
attggcggccctttagttttggcattgacagcaacggctacaccggcagttcgaatggat
attcaaaggctattgtttagagaaaatcaagcaaaggaatttattttttctgttgaccgt
cctaatatcagttactttgtctaccaaaagactaaattggaaaagctacaagaactgata
acgaccttagagggttccggtattatttattgtgctactcgaaaaaaagttgaagaactg
tatcaaacgtttaaacaccagcacgcgattgcctattatcatggtggtttaagcggtcaa
gaacgacgaatgcttcagcagcaatttttagcagacgatttacggattttgattgcaacg
aatgcatttggtatggggattaacaaagaaaatattcgctttgtaattcattatgatttg
ccagattcgccagagaattatttacaagaggttggtcgtgccggtagagatggtcagcca
agtcaagcaattttgttatatgaagcaggtgatgagtatattcatcattttcttcaggag
caaaccgatcaatccaaaaaattatttgagatcaagcaacgaatgactgatttggtcttt
gaggatccgttaataaaaaaatgggagcaatttttccccaacgaaagctctcgcttaatg
gatttattaagccaacgaggtaagactaaaaaaattcaactacaaaaaatgttggattat
atttcgacaaaggaatgtcgtcgagcttttttgatcgcttattttggtgaaacatccgct
ggggaaaatcataattgctgcgataatgatggtgctttattgaaggcgaaaccagtgaaa
cagttaaacagtgaggcccacctttcttgggaaaaaattattcaaaaaatttttaaaaat
gatgagaaagattga
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