Enterococcus avium: EH197_15160
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Entry
EH197_15160 CDS
T05982
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
eav
Enterococcus avium
Brite
KEGG Orthology (KO) [BR:
eav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eav03019
]
EH197_15160
03009 Ribosome biogenesis [BR:
eav03009
]
EH197_15160
Enzymes [BR:
eav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EH197_15160
Messenger RNA biogenesis [BR:
eav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EH197_15160
Ribosome biogenesis [BR:
eav03009
]
Prokaryotic type
rRNA helicases
EH197_15160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
NAT10_TcmA_helicase
DUF2608
CMS1
Microtub_bd
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
QCQ13455
LinkDB
All DBs
Position
2966088..2967437
Genome browser
AA seq
449 aa
AA seq
DB search
MRTFESFNFQPFILEAIKDKGFTEPTAVQEKLIPLIKKGKNVVGQSQTGSGKTHTFLLPL
MNKIDAAKDEVQIVITAPSRELATQIYQAAIQIAKFSPNEIRVTNFVGGTDKQRQIDKLA
THQPHVAIGTPGRILDMMNEQALKVHTAEYFVVDEADMTLDMGFLAEVDQIAGRLPKHLQ
MLVFSATIPEKLRPFLLKYMENPVIEEIKSKAVISDTIENWLISTKGQDKNRLIYQLLTI
GHPYLAIVFANTKQHVDEISDYLKSQGLKVAKIHGDISPRERKRVMRQVQNLDYQYVVAT
DLAARGIDIEGVSHVINAEIPQDLDFFIHRVGRTGRNGLSGTAITLYGPSDENDVNLIEN
LGVTFQPKEIKNGEIIDTYDRNRRKKREKSKDELYPTLIGLVKKSKKKIKPGYKKKIDRA
ISESNKQKRRVARRQEERGARKNKKRSNS
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcgaacttttgaatcattcaatttccagccgtttattcttgaagccatcaaggataag
ggttttactgaaccaacagcggttcaagaaaaattaattcctttaattaaaaaagggaaa
aatgttgtcggacagtcacaaacaggttcaggaaaaacccatacgtttttgctgccatta
atgaataagatcgacgccgctaaagatgaggttcaaattgtcatcacagcgccaagccgc
gaactagcgacgcaaatttatcaagccgccattcaaattgcaaaattttcaccaaatgaa
atccgcgtaaccaattttgtgggcggaactgacaagcaacggcaaatcgacaaattagcg
acgcatcaaccacatgtcgctatcggaaccccaggtcgtatcttagatatgatgaatgag
caagcattaaaagtccatacggcagagtattttgtggtcgacgaagcggatatgactttg
gatatgggatttttagctgaagtcgatcaaattgctggtcgtttaccgaagcatttacaa
atgttggtcttctcagcaacgattccagaaaaattacgtcccttcctattaaaatacatg
gaaaatcctgtgattgaagaaattaagtcaaaagcagtaatttccgatacgatcgaaaat
tggctcatttctactaaaggacaggacaagaatcgtttgatttatcaattattgacgatt
ggtcatccatatttagcgattgttttcgccaatacgaaacagcatgtcgatgagatcagt
gattatttgaaatcacaagggttaaaagtcgcgaagattcacggggatatttcaccccga
gagcggaagcgtgtaatgcgccaagtacaaaatctagattatcaatatgttgtcgcaaca
gacttggctgctcgaggaattgacattgaaggggtttctcatgttattaacgcagagatt
ccccaagatttggatttctttattcatcgtgtgggcagaacaggtcggaacggcttgtct
ggcacggcgattactttgtatggtccaagcgatgagaacgatgttaatttaattgaaaat
ctcggcgtgactttccaaccaaaagagatcaaaaatggggaaatcatcgatacttatgat
cgtaatcgtcgaaagaaacgcgaaaaatcaaaagatgagctatatccaactctaattggt
ttggttaaaaaatcaaagaaaaaaattaagcctggctacaagaaaaaaattgatcgcgca
atttctgaatcgaataaacaaaaacgtcgtgtagctcgtcgtcaagaagaacgtggcgca
cgtaagaataaaaagcgttcaaactcttaa
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