Enterococcus avium: EH197_18250
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Entry
EH197_18250 CDS
T05982
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
eav
Enterococcus avium
Brite
KEGG Orthology (KO) [BR:
eav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eav03016
]
EH197_18250 (truB)
Enzymes [BR:
eav01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
EH197_18250 (truB)
Transfer RNA biogenesis [BR:
eav03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EH197_18250 (truB)
Prokaryotic type
EH197_18250 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Glyco_hydro_120_ins
ox_reductase_C
Motif
Other DBs
NCBI-ProteinID:
QCQ15190
LinkDB
All DBs
Position
complement(3569249..3570190)
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AA seq
313 aa
AA seq
DB search
MDGILPLWKERGMTSHDCVFKLRKILQTKKVGHGGTLDPDVDGVLPICIGKGTKVIEYLQ
DSGKIYEGEITLGFSTTTEDRSGEIVEKKAVDRPLTEAEIDRVMAAFIGKIKQIPPMYSA
VKVNGKRLYEYARAGETVDRPEREAEIESFKRTTAPIYNEEAKTQSWRFQVTCGKGTYVR
TLAVDLGAKLDYPAHMSDLTRLVSGGFSVGQAVTLSQVSELMEKGQINQALQPIEEAMKE
FPRIDLTDAAWQKVKNGQVLSMKSFGIKKMPADLIAFFYQGKLVSLYGQHPEKNWLLKPS
KVIRNEIAQVPQA
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggacggtatcttgccgttatggaaagagcgcggcatgacaagtcatgactgtgtcttt
aaattacgaaaaattttacaaacaaaaaaggttggtcatgggggaactttggatcctgac
gtcgatggggtattacctatctgtattggtaagggaaccaaggtgatcgaatatttacaa
gatagtgggaaaatttatgaaggtgagattacgttgggcttttctacaactacagaagat
cgcagtggtgaaatagtagagaaaaaagcagtagaccgccctttaactgaagctgaaatt
gatcgagtaatggctgcttttatcgggaaaatcaagcagataccaccaatgtattcagcg
gttaaagtcaacgggaaaagattgtatgagtatgcgcgtgctggtgaaacggtagatcgc
cctgaacgggaagcggagattgagagttttaaacgtacgactgctccgatttataatgaa
gaagcaaaaactcagagttggagatttcaagttacttgcgggaaaggtacttatgtacgg
accttggctgttgatcttggggcaaagctagactatcctgctcatatgtccgatcttact
cgtttagtcagcggcggtttttcagtgggacaggcagtcacattgtcgcaagttagcgaa
ttgatggaaaaaggtcagatcaatcaagcattgcaaccgattgaagaggcaatgaaggaa
tttccgcgaattgacttaacagatgctgcttggcaaaaggtaaaaaatggacaagttcta
tctatgaaatcttttggaatcaaaaagatgccagctgatctgatcgcatttttttatcaa
ggaaaattagttagtctttacggacaacacccagaaaaaaactggcttttgaaaccaagc
aaagtaattcgaaacgagattgctcaagttcctcaggcttag
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