KEGG   Enterococcus avium: EH197_20405
Entry
EH197_20405       CDS       T05982                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
eav  Enterococcus avium
Brite
KEGG Orthology (KO) [BR:eav00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:eav03400]
    EH197_20405
Enzymes [BR:eav01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     EH197_20405
DNA repair and recombination proteins [BR:eav03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    EH197_20405
SSDB
Motif
Pfam: Helicase_C_2 RNase_T DEAD ResIII RNase_H_2 DEDDh_C DEAD_2 TF_AP-2
Other DBs
NCBI-ProteinID: QCQ14391
LinkDB
Position
complement(4020848..4023601)
AA seq 917 aa
MKKNYAVVDIETTGTDPKTDRIIQFGCVLIEDGKIVTHFSTDINPDQPIPAQIQTLTGIT
NQRIKRAPYFEDVAQTITNLLADTIFVAHNIHFDYPFLSNELERCGMPPLTIPGIDTVEL
AQVFMPTSLSFRLKDLAEELHLVHENPHQADSDADVTAQLLLHLEAKIKELPIITLEKII
DTADQMAFQTKNYLENCLREMQDNPKPLSKDLAIIHGLALRKKQVPLFSENYFGTKAYPR
SRKAKEKVYQGELDFRKEQARLMNLVYDFFNKKDDKNVLVEAATGIGKTLGYLLPMSFLA
TPEKPIIVSTVSLLLQEQILNHDLPLINRLLDQPLQAVVMKSSRHYIDLERFYQSFEKKS
EQKQYTFYQMALLVWLTQTETGDFDELNMTSLKHPFWQEVAHLGTHTLNPNSPFYAVDFI
RHRQKKLTQSNLIVTNHAYLAQEDQRKEPQLPKSPYLIIDEAHHLNRVLEKVTSQHFNLL
AIQRMITHLFDNQQFSVWQALVQKDQQTQHLLEIFQDVLQELNEDLTDFYQIFKDEYPTE
NERLITKDMIDQLSLAGEQVLQRIGRLYQDALTLGDQLQAYFTMYKETFGIKEQAEWSDL
QLLLESLAQQQQAFETFSEKWDARYIHWFNAKRKTFQVQDLDASLISQTKWYDRYQQILY
LGGTLKIGSDRHYFAKRWGIPDAALKIISSPYDYAEQARLYLPTNSISIQSTSPDQYANY
VASVVYKMAENQKRPILVLFTSHDVLNRVYQRVRVPLLNEGREVLAQGIGGSREKLLKRF
LLSQDALLFGADSFWEGIDLPGDILQILIVTRLPFENPQRLQVKARNDFLAAEGINPFFQ
EAVPHAALRLRQALGRLIRSEKDKGVMLLLDQRFITAGYGEKLRKALPKELPIKQLPLEE
ILLETDQFLNSDKSTEN
NT seq 2754 nt   +upstreamnt  +downstreamnt
gtgaaaaaaaattatgcagttgttgatattgaaacgactggaacagaccctaaaacggat
cgaatcattcaattcggttgtgtattaattgaagatgggaagattgtcacgcatttttcg
accgatatcaatccggatcaaccgatcccagcgcagatccaaacgttgactggaatcacg
aatcagcgaatcaaaagggccccctattttgaagacgtggcgcaaacgattacgaactta
ttagcggatacgatctttgtagctcacaatattcattttgactatccctttttaagtaat
gaattagaacgctgtgggatgccgccgctgacgattcctggtattgatactgtagaatta
gcgcaagtattcatgcctacctctttgagttttcgcttaaaggatttggcagaagaactg
catttggttcatgaaaacccgcatcaggctgatagcgatgcagatgtgacagcgcaatta
ttgctgcacttagaagcgaaaataaaagagctgccaatcattaccttagaaaaaataatt
gatactgctgatcagatggcttttcaaacaaagaattacttggaaaattgcttaagagag
atgcaggacaatcctaaaccattatcaaaagatttagccattattcatggtttggctttg
cgaaagaaacaggtgccgctcttttctgagaattattttggtacgaaggcttatccgcgt
tcgcgaaaggccaaggagaaggtctatcaaggagaattggattttcgaaaagaacaggct
cgtttgatgaacctggtgtacgatttctttaataaaaaggatgacaaaaatgttttggtg
gaagccgcaacaggaatcggcaagacactaggctacttgttgcctatgagttttttagca
acaccagaaaagccgataatcgttagtacggtatctttattgctgcaggaacagattttg
aatcatgatctgccactgatcaatcgtttattggatcagcctttgcaggcggtggtgatg
aaaagtagtcgacattatattgatttagaacgcttctatcaaagctttgaaaagaaatct
gagcaaaagcaatatactttttatcaaatggctttgctcgtttggctcacccaaaccgag
accggggattttgatgaactgaatatgaccagtttaaagcatcctttttggcaagaagta
gctcatttaggaacgcatacattgaaccctaatagccctttttatgcggttgattttatt
cgtcaccgtcagaaaaaattgactcaaagtaatttaattgtgacaaatcacgcttactta
gcccaagaggatcagcgcaaagagccacagctgccgaagagtccttatttgatcattgat
gaggcacatcatttgaatcgggtgttggaaaaagtgactagccagcattttaatcttcta
gcaattcaacgcatgatcactcatttgttcgataatcagcaattttctgtttggcaggca
ctcgtacaaaaggatcaacagacgcagcatctacttgaaatttttcaagatgtattgcag
gaattgaatgaggatttgactgatttttatcaaattttcaaggacgaatacccaacagaa
aatgagcggttgattactaaagatatgatcgatcagctttctctagctggcgaacaagtt
ttacagcgtatcggtcgtctttatcaggacgccttgacgctaggggatcagttgcaggcg
tattttacgatgtacaaagagacatttggtatcaaggaacaggcggagtggagtgacctt
cagttattgttagagagtttggcccagcaacagcaagcgtttgagacctttagcgaaaaa
tgggatgctcggtatattcattggttcaatgcgaaacgtaaaaccttccaagtacaggat
ttagatgcttcattgatcagccagacaaaatggtatgatcgttatcaacaaattctttat
ttaggcggtacgttaaaaattggcagtgatcgtcattattttgcgaagcgctggggaatt
ccagatgccgcattgaaaatcattagcagtccctatgattatgccgaacaagcgcgtttg
tatttgccgactaacagtatcagtatccagtcgacctcgcctgatcagtacgcgaattat
gtagccagtgttgtttataagatggcagaaaatcaaaaacgtccgatcctagttctgttt
acttcgcacgatgtattgaatcgtgtttatcagcgtgtgcgtgttcctttattaaacgaa
ggcagagaagtattagctcaaggtatcggcggcagtcgcgaaaaacttctgaagcggttt
ttattgtctcaagatgcgttgctgttcggtgcggatagcttttgggaagggatagattta
ccaggagatattttgcagattttgatcgtaacacgtctaccatttgaaaatccgcagcgg
cttcaagtaaaagcgcgcaatgattttttagcagcagaaggaatcaatccctttttccaa
gaagcggttcctcatgctgcattgcgattgcggcaagcattgggacgcttgattcgctca
gaaaaggataagggtgtgatgctgttattagatcaacgctttatcactgctggctatggg
gaaaaattacgcaaagctttgccaaaagaattgccgatcaaacagctaccgttggaagaa
atcttacttgagaccgaccaatttttaaattctgacaaaagtacagagaattaa

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