Enterococcus avium: EH197_20450
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Entry
EH197_20450 CDS
T05982
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
eav
Enterococcus avium
Pathway
eav03030
DNA replication
eav03430
Mismatch repair
eav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EH197_20450 (holB)
03430 Mismatch repair
EH197_20450 (holB)
03440 Homologous recombination
EH197_20450 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eav03032
]
EH197_20450 (holB)
03400 DNA repair and recombination proteins [BR:
eav03400
]
EH197_20450 (holB)
Enzymes [BR:
eav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EH197_20450 (holB)
DNA replication proteins [BR:
eav03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EH197_20450 (holB)
DNA repair and recombination proteins [BR:
eav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EH197_20450 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
COLFI
Motif
Other DBs
NCBI-ProteinID:
QCQ14400
LinkDB
All DBs
Position
complement(4030499..4031437)
Genome browser
AA seq
312 aa
AA seq
DB search
MEEAKKLQTIQPIVFRQLQNSFEHGRLAHAYLFEGDQGTGKAELALWFAKHQFCLNLQEE
MPCETCNNCLRITSKDHPDVVEIEPDGQSIKVDQIRALQSELTKSGFESAKKVVIIHQAE
KMNMNSANSLLKFLEEPPANFMIILETQSLGKILPTIRSRCQIIHFQALSTERLQSRLEA
EQIPEKTAKLLANLTNSYTKAVEISKDEWFNEARDVVIQWFNYLEKNDPQAFIYVQKKMV
RTFKDKAQQQLAFEMLAYFVKEKRDQVMRQNQIGVEKYNYLLEDVLSASQKLEANVSFQN
IAEQITLHIVYA
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagcgaaaaaactccagacaattcagcccattgtttttcgccaattacaaaac
agttttgagcatgggcgtttggcccatgcttatctttttgaaggcgaccaaggaacaggc
aaagcagaattggcattatggtttgccaagcatcagttctgtttaaatttgcaagaggaa
atgccttgcgaaacatgtaacaattgtctgaggataaccagtaaagatcatcccgatgta
gttgaaatcgaacctgatggacaatccatcaaagttgatcaaataagagcactgcaaagt
gagttaaccaaaagcggctttgaatctgcgaaaaaagtcgtgattattcaccaagcagaa
aaaatgaatatgaactcggctaacagcctactaaagtttttggaagaaccaccagctaac
tttatgattattctagagacccagtcgctaggaaaaattttacctacgattcgctctcgt
tgtcagatcatccacttccaagcgttgtccacagaacgcttgcagtctcgtttagaggca
gaacaaatccctgaaaaaactgcaaaactcttagcaaatttaacaaatagttatacaaaa
gctgttgaaatctcaaaagatgaatggtttaatgaagctagagatgttgttattcaatgg
tttaattatctcgaaaaaaatgatccgcaagcgtttatctatgttcagaaaaaaatggtc
aggacgtttaaggacaaagcacagcaacagctcgcctttgagatgttggcgtattttgtg
aaggaaaaacgtgatcaagtgatgagacaaaatcaaataggtgtagaaaaatacaattac
ctattggaagatgttttatccgccagtcagaaactagaagcaaacgtatcatttcaaaat
atcgcagaacaaataacgttacacattgtttatgcttaa
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