Enterococcus avium: EH197_21990
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Entry
EH197_21990 CDS
T05982
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
eav
Enterococcus avium
Brite
KEGG Orthology (KO) [BR:
eav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eav03019
]
EH197_21990
Messenger RNA biogenesis [BR:
eav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EH197_21990
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
QCQ14667
LinkDB
All DBs
Position
complement(4349353..4350297)
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AA seq
314 aa
AA seq
DB search
MKKIKELTVDEQFEMYVLIKNADVRLAKNGKKFIAFTFQDTSGTVDGKFWDASEEEIKRY
RAGQVVFLNGKREMYQGNPQVKIMHLRTTKPEEPNDPALYMERAPIKREEMEEEINKTLF
EITNAHWNRIVRFLLNKYQKEFFEFPAAKRNHHAFAGGLAFHTLTMLRLGKAIVKEYPQL
NASLLYAGIIIHDLGKVIELTGPSSTEYTVVGNLVGHLVLVDEEITKACTELKINDADED
IVVLRHMVLSHHGLLEYGSPVRPRIMEAEILHQIDNIDASMQMMSSAVKNAEPGTYTERL
FGMDNRSFYVPKDI
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatcaaagaattaacggtcgatgagcagtttgagatgtatgtattgatcaaa
aatgcggatgttcgtttagcgaaaaacgggaaaaaatttatcgcttttactttccaagat
acttctgggacagttgatggtaaattttgggatgcatctgaagaagagattaaacgttat
agagctggccaagttgtttttctaaacggcaagcgagaaatgtatcaaggtaatccgcag
gtcaaaatcatgcacctgcgtacaacaaaaccggaagagcctaatgatcctgcgttatat
atggagcgtgcgccaatcaagcgtgaagaaatggaagaagagatcaataaaacgttgttc
gagatcacaaacgctcattggaatcgaatcgttcgctttttactaaataaatatcagaag
gaattttttgagtttccagcagccaaacgaaatcatcatgcttttgctggtgggttggct
tttcatacgttgacgatgctgcgtctcggtaaggcgatcgttaaagaatatccgcaatta
aatgcttctttgctttatgcgggaatcattattcatgatctaggaaaggtgatcgagttg
acgggaccttcgtcaactgaatatacagtagtaggtaatttagtaggacatttggttcta
gtagatgaagaaatcaccaaagcctgcacggaattgaaaattaatgatgcagatgaggac
atcgttgttttacgccatatggtgttgtctcatcatggtttgttggagtacggttcacca
gtccgtccaagaatcatggaagctgaaattttgcatcaaatcgataatatcgatgcatcg
atgcagatgatgtccagcgctgtgaaaaatgctgagccaggaacatatacggaacggctt
ttcggaatggataatcgcagcttttatgtaccgaaagatatttag
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