Ensifer aridi: ACEP9W_01780
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Entry
ACEP9W_01780 CDS
T10792
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
eaw Ensifer aridi
Pathway
eaw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eaw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACEP9W_01780 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eaw03019
]
ACEP9W_01780 (recQ)
03400 DNA repair and recombination proteins [BR:
eaw03400
]
ACEP9W_01780 (recQ)
Enzymes [BR:
eaw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACEP9W_01780 (recQ)
Messenger RNA biogenesis [BR:
eaw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACEP9W_01780 (recQ)
DNA repair and recombination proteins [BR:
eaw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACEP9W_01780 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
XFE86445
LinkDB
All DBs
Position
336648..338513
Genome browser
AA seq
621 aa
AA seq
DB search
MPDSPNPTARRFEAEGAANPLDVLKRVYGYSAFRGEQQAVIEHVVEGGDAVVLFPTGAGK
SLCFQIPALCRRGVGIVVSPLIALMRDQVEALKQLGIRAAALNSSLTREEAIAVRRALAS
AALDLLYVTPERAVTDGFAEMIGDIDVALFAIDEAHCVSQWGHDFRPEYRGLDCLASRFP
GVPRIALTATADPHTRDDIVERLALTRARVFTSSFDRPNIAYEIVERDQPRLQLLRFLRH
FKDASGIVYCLSRAKVEDTAEWLNAQGIRALPYHAGMERALRDAHQDAFLKEEKLCLVAT
VAFGMGIDKPDVRYVAHLDLPGSVEAYYQETGRAGRDGLPSEVWMAYGMADVIQRRRMID
DGGAPEEIKRIERSKLNALLAICETAGCRRQAILAHFGEAHPGGCGHCDTCLKPVDTWDG
TEAAIKALAAVYRTGERFGTGHVIDVLMGTVNEKTERFGHVDMPVFGAGKDLPARTWQSV
FRQLLAASLITVDHTAFGALKLEPEARSVFRRERQVLFRKDRAASGRAARAQKSAAARER
SDLAGSDLELFELLRAERLSIAREMDVPPYVVFPDTSLIALAKRRPRDFVDLIDIPGIGE
SKRERYGEAFLAVIEEFEDGR
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacagccccaatcccaccgcacgccgtttcgaagcggaaggcgccgctaatccc
ttggacgtcctcaaacgcgtctatggctattccgcctttcgcggtgagcagcaggcggtc
atcgaacatgtggtcgagggcggcgatgccgtcgtgctctttccgaccggggccggcaag
tcgctgtgcttccagattcctgcgctctgccgcaggggcgtcggcatcgtcgtctcgccg
ttgatcgcgctcatgcgcgaccaggtggaggcgctgaagcagctcggcattcgcgccgcg
gcgctcaattcttcgctcacgcgggaggaggcgatcgccgtccgccgggcgcttgcgtcg
gcggcactcgacctgctctatgtcacaccggagcgcgccgtcaccgacggcttcgccgag
atgatcggcgacatcgatgtcgccctcttcgcaatcgatgaggcgcactgcgtgtcgcaa
tgggggcacgatttccgtcccgaatatcgcggcctcgattgccttgcgtcgcgctttccc
ggcgtgccgcgcattgcattgaccgcgaccgcagatccgcacacgcgcgacgatattgtc
gagcggctggcgctgacccgtgcgagggtcttcacatcgagcttcgatcggcccaacatc
gcctacgagatcgtcgagcgtgaccagccgcgcctgcagctcctgcgcttcctgaggcac
ttcaaggatgcaagcggcatcgtctattgcctttcgcgtgccaaggtcgaggacacagcg
gaatggctgaacgcccaagggatccgcgcgcttccctatcatgccggcatggagcgggcg
ctgcgcgatgcccatcaggacgcgttcctgaaggaggagaagctgtgcctcgtcgcaacg
gtcgccttcggcatggggatcgacaagccggacgtgcgctatgtagcgcatctcgacctg
ccgggttcggtcgaggcttattatcaggaaacggggagggcggggcgcgacgggctgccc
tccgaagtctggatggcctatggcatggccgacgtcattcagcgccggcggatgatcgac
gacggcggcgcacccgaggagatcaagcggatcgaaagatcgaagctcaatgcgttgctg
gcgatctgcgagacggcgggttgccggcggcaggcgatcctggcgcatttcggcgaggcc
catcccggcggctgcggtcattgcgatacctgcctgaagccggtcgacacctgggacggc
actgaagcggcgatcaaggcgctcgccgccgtctaccgcaccggcgagcgcttcgggacc
ggccatgtgatcgacgtgctgatgggaacggtgaacgagaagacagagcgcttcggccat
gtcgacatgccggtcttcggtgccggcaaggacctgccggcgcggacgtggcaatcagtc
ttccggcaactgctcgccgcaagtcttattaccgtggatcacacggccttcggggcgctc
aagctcgagccggaggcgcgtagcgtcttccggcgtgagcggcaggttctcttccgcaag
gaccgagctgcttccgggagagccgcgcgcgcgcagaaatcggccgccgcccgcgaacgt
tcggatctggcgggctctgatctggagctctttgagctgctccgcgccgagcgcctgtcg
atcgcccgcgagatggacgtgccgccctatgtggttttcccggacacgagcctgatagcg
ctcgccaaacggcgcccgcgcgacttcgtcgacctcatcgacattccgggcatcggcgag
agcaagcgggagaggtatggcgaggcgtttctcgcggtgatcgaggaatttgaggacggc
cgctga
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