Ensifer aridi: ACEP9W_07420
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Entry
ACEP9W_07420 CDS
T10792
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
eaw Ensifer aridi
Brite
KEGG Orthology (KO) [BR:
eaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eaw03032
]
ACEP9W_07420 (topA)
03400 DNA repair and recombination proteins [BR:
eaw03400
]
ACEP9W_07420 (topA)
Enzymes [BR:
eaw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ACEP9W_07420 (topA)
DNA replication proteins [BR:
eaw03032
]
Prokaryotic type
DNA Topoisomerases
ACEP9W_07420 (topA)
DNA repair and recombination proteins [BR:
eaw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ACEP9W_07420 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Peptidase_M35
Motif
Other DBs
NCBI-ProteinID:
XFE87460
LinkDB
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Position
1489893..1492559
Genome browser
AA seq
888 aa
AA seq
DB search
MNVVVVESPSKAKTINKYLGPGYKVLASFGHVRDLPAKDGSVRPDEDFEMSWEVDGASAK
RMKDIADAVKSSDGLILATDPDREGEAISWHVLDLLKKKKVIGDKPVKRVVFNAITKKAV
LDAMAEPRDIDASLVDAYLARRALDYLVGFNLSPVLWRKLPGARSAGRVQSVALRLVCDR
EAEIERFVSEEYWNISALLKTPRGDEFEARLVSADGKRLQPKAIGNADEANRLRALLDGA
SYVVESVEAKPVKRNPSPPFTTSTLQQAASSKLGFSATRTMQVAQKLYEGVDVGGETVGL
ITYMRTDGVQMAPEAIDAARRAIGSQFGERYLPEKPRFYSTKAKNAQEAHEAIRPTDFNR
TPDQVRRFLDGDMLKLYDLVWKRGIASQMASAEIERTTAEILADNGGKKAGLRATGSVIR
FDGFIAAYTDAKEDGEQADDEDGGRLPEINARENLAKQKINATQHFTEPPPRYSEATLIK
KMEELGIGRPSTYAATVSTLIDRDYVAIDKRKLVPQAKGRLVTAFLESFFTRYVEYGFTA
SLEEKLDQISAGELNWKDVLREFWRDFFSQIEDTKELRVTNVLDALNEELAPLVFPKRED
GGDPRICQVCGTGKLSLKLGKYGAFVGCSNYPECNYTRQLSSENNGDAEAAVSNEPQSLG
KDPHTGEEITLRSGRFGPYVQRGDGKDAKRASLPKGWTPATIDHEKAVALLSLPRDIGKH
PETGKMISTGIGRYGPFVLHDGTYANLDSVEDVFSIGLNRAISVLADKQSKGASGARGRT
AAASLKELGEHPEGGAITVRDGRFGPYVNWGKVNATLPKGKDPQSITVEEALALIAERAA
KGGATKAKGSKVKAASTKAAKARSVGTAKSDKPKAAPKTKTAAKAKKG
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttgtagtggtggaatcgccttccaaggccaagacgattaacaagtatctcggc
cccggctacaaggtgcttgcttcgttcggccacgtgcgggatctgcctgccaaggacggg
tcggttcgccccgacgaagacttcgagatgtcatgggaagtcgacggcgcctcagcaaaa
cggatgaaggacattgccgacgcggtgaaatcgtccgacggattgatcctcgcgactgac
ccggatcgcgaaggtgaggcaatctcctggcacgtgctggaccttctcaagaagaagaag
gtcatcggcgacaagccggtcaagcgcgtcgtcttcaacgcgatcaccaaaaaggctgtg
ctcgacgctatggcggagccgcgggacatcgacgcctcgctggtggacgcctatcttgcc
cgccgtgcgctcgactatctcgtcggcttcaacttgtcgcccgttctctggcgcaagctg
ccgggcgcgcgctcggccggccgcgtgcaatcggtggcactgcgtctcgtctgcgatcgc
gaggcggaaatcgagcggttcgtctccgaagaatactggaacatctcggcgctcctgaag
acgccgcgcggcgacgagttcgaagcgcggctcgtttcggccgacggcaaacggctgcag
ccgaaagcgatcggcaatgcagacgaagccaaccggctgagggccctgctcgacggcgcg
agctacgtggtcgaaagcgtcgaggccaagccggtcaagcgcaatccctccccgcctttc
accacctcgacgctgcagcaggccgcgtcctcgaagctcggcttctcggccacacgcacg
atgcaggtggcgcagaagctctacgaaggcgtcgatgtgggcggcgaaaccgtcggtctc
ataacctatatgcgtaccgacggcgtgcagatggcgccggaagcgatcgacgccgctcgc
cgggcgatcggcagccagttcggcgaacgctacctgccggaaaagccacgcttctattcc
accaaggcgaagaacgcccaggaagcgcacgaagcgatccgcccgacggatttcaaccgc
acgcccgaccaggtccgccgcttcctcgacggcgacatgctgaagctctacgacctcgtc
tggaagcgcggcatcgccagccagatggcgtctgccgaaatcgagcggacaaccgccgag
atcctggccgacaacggcggcaagaaggcgggcctccgggcgaccggttcggttatccgc
ttcgacggctttatcgccgcctacaccgacgcgaaggaagacggcgagcaggcggatgac
gaggacggcggccgcctgccggagatcaatgcgcgcgaaaatctcgcgaagcagaagatc
aacgccacccaacacttcaccgagccgccgccgcgctattcggaagcgacgctcatcaag
aagatggaagaactcggcatcggccggccctcgacctatgcggcgacggtcagcacgctc
atcgatcgcgattatgtagcgatcgacaagcgcaaactggtaccgcaggccaagggtcgg
ctggtgacggcgttcctcgagagcttcttcacccgctatgtcgagtacggtttcaccgca
tcgctcgaggagaagctcgaccagatttccgccggcgagctcaattggaaggacgtgctg
cgagaattctggagggacttcttctcccagatcgaggacacgaaggaactgcgcgtcacc
aacgtgctcgatgcgctgaacgaagaactggccccactcgtcttcccgaaacgcgaggat
ggcggcgacccgcgtatctgccaggtctgcggtaccggcaagctctcgctgaagctcggc
aaatacggcgccttcgtcggttgctccaactatccggagtgcaactacacccgccagctt
tcgtccgagaacaacggcgatgcggaggcggccgtatccaacgagccgcagagtctcggc
aaggatccgcacaccggcgaggaaatcaccttgcgcagcggccgcttcggtccttacgtc
caacgcggcgacggcaaggacgccaagcgtgccagcctgccgaagggctggacaccggcg
acgatcgatcacgaaaaggccgtcgcccttctctcgctgccgcgcgacatcggcaagcac
ccggaaacaggcaagatgatctccaccggcatcgggcgctatgggccgttcgtgctgcat
gacggcacctacgccaatctcgattcggtcgaggacgtcttctcgatcgggcttaaccgc
gcaatttcggtgctagcggacaagcagtccaagggcgcaagcggcgcacgcgggcgtacc
gctgccgcatccctgaaggaactcggggaacatcccgagggcggcgcgattactgttcgc
gacggccgcttcggcccctatgtcaattggggcaaggtcaatgccacgctgcccaagggc
aaggacccgcaatccatcacggtcgaggaggcgcttgcgcttatcgccgagcgcgcagcg
aagggcggcgcgacaaaggccaaaggaagcaaggtaaaggcggcttcgacgaaagccgcc
aaggcgaggtcggtcgggactgcaaagtccgacaagccgaaagccgctccaaagacgaaa
acggccgcgaaggccaagaagggctga
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