Ensifer aridi: ACEP9W_27550
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Entry
ACEP9W_27550 CDS
T10792
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
eaw Ensifer aridi
Brite
KEGG Orthology (KO) [BR:
eaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eaw03032
]
ACEP9W_27550
03400 DNA repair and recombination proteins [BR:
eaw03400
]
ACEP9W_27550
Enzymes [BR:
eaw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ACEP9W_27550
DNA replication proteins [BR:
eaw03032
]
Prokaryotic type
DNA Topoisomerases
ACEP9W_27550
DNA repair and recombination proteins [BR:
eaw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ACEP9W_27550
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Top1B_N_bact
Topoisom_I
Motif
Other DBs
NCBI-ProteinID:
XFE88740
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Position
pRCAM05007a:complement(2085934..2087073)
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AA seq
379 aa
AA seq
DB search
MPLQATLTPTDKRAAMMQNRFEEEAVRDPGSGLDLIPPREAGLVYVSDSEPGIRRLRCGK
GFVYKMPDGSTVTDPATKARISALGLPPAYQNVWICLDENGHLQATGFDARGRKQYRYHE
KWQALRSGDKFAQLVPFGKALPRIRRVVRRHMEGSPDDVQTILAALVALLDEAHLRTGSP
AYVEENATYGATTLLKRHLKLVDGCIELKFAAKGGKRVTRRLRRPKLQRLLEEIADLPGR
QLFVWKDENDALRPVDSGRLNRYLAGIAGFPVSAKTFRTWAGSVAAFAAARAALDENGRA
TVKQMSEAAASALCNTPAICRKSYIHPDILSLAGSGSSTSARQLQVRGGAKPELRAEEAR
MLNFLARAERARRRSDGPR
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgccgttgcaagccaccctcacgccgacggacaaacgtgcggcaatgatgcaaaaccgc
ttcgaagaggaagcggtgcgcgatccaggcagcggcttggacctgattccgccgcgggaa
gccggcctcgtctatgtcagcgattccgagcccggcatcaggcggctgcgctgcggcaag
ggcttcgtctacaaaatgcccgacggctctaccgtcaccgaccccgcgacgaaagctcgc
atttcggcactgggcctgccgccggcctaccagaacgtctggatctgcctcgatgaaaac
ggtcacctgcaggcgactggcttcgacgcacgcggtcgcaagcaataccgctatcatgag
aaatggcaggcgcttcgaagcggcgataagttcgctcaactggtccccttcggcaaggcg
ctgccgagaataaggcgcgtggtgcgacgccacatggagggtagcccggatgacgtccag
accattctcgccgcacttgttgcgctgctcgacgaggcgcatctgcgcacgggaagtccc
gcctatgtagaggaaaatgcaacctatggggcgacgaccctcttgaaacgtcacctgaaa
ctggtggacggatgcatcgaactcaaattcgccgccaagggcggcaagcgtgtgacgcgg
cggcttcgccgcccgaagctgcagcgcctgcttgaagaaatcgcagacctgccgggacgg
cagctcttcgtctggaaggacgagaacgacgctctccgtcctgtcgattcgggtcgcctc
aaccgctacctcgctgggatagccggctttccggtctcagcgaagacatttcggacctgg
gcgggaagcgtcgccgcttttgcggccgcgcgagccgcgctcgacgaaaacgggcgcgcg
acggtcaaacagatgagcgaggctgcggcatcggcactttgcaatacgccggccatctgc
cgcaaaagctacatccatccagacattctctctcttgccggcagtggttcctcgacctcg
gccaggcaattgcaggtgcgcgggggagcgaagccggagttgcgtgccgaggaagcacgt
atgctcaatttcttggctcgtgccgagcgagcccgaagacgaagcgacgggccccgatga
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