Enterobacter adelaidei: AAHF05_08580
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Entry
AAHF05_08580 CDS
T10740
Symbol
rne
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
eax Enterobacter adelaidei
Pathway
eax03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AAHF05_08580 (rne)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eax03019
]
AAHF05_08580 (rne)
03009 Ribosome biogenesis [BR:
eax03009
]
AAHF05_08580 (rne)
Enzymes [BR:
eax01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
AAHF05_08580 (rne)
Messenger RNA biogenesis [BR:
eax03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AAHF05_08580 (rne)
Ribosome biogenesis [BR:
eax03009
]
Prokaryotic type
rRNA processing factors
AAHF05_08580 (rne)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
PNPase_C
S1
Motif
Other DBs
NCBI-ProteinID:
XGV93056
LinkDB
All DBs
Position
complement(1754741..1757857)
Genome browser
AA seq
1038 aa
AA seq
DB search
MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKGKITRIEPSLEAAFVDY
GAERHGFLPLKEIAREYFPANYNSHGRPNIKDVLREGQEVIVQIDKEERGNKGAALTTFI
SLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALASLELPDGMGLIVRTAGVGKSAEAL
QWDLSFRLKHWEAIQKAAESRPAPFLIHQESNVIVRAFRDYLRQDIGEILIDNPKVLELA
RQHIAALGRPDFTSKIKLYTGEIPLFSHYQIESQIESAFQREVRLPSGGSIVIDTTEALT
AIDINSARATRGGDIEETAFNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQRAVE
NRLREAVRQDRARIQISHISRFGLLEMSRQRLSPSLGESSHHVCPRCSGTGTVRDNESLS
LSILRLIEEEALKENTKEVHAIVPVPIASYLLNEKRAAVSAIEARQGGVRCIIVPNDQME
TPHYHVLRVRKGEETTTLSYLLPKLHEEEMALPSDEEPAERKLPEQPALATFIMPEAPPE
TALEKPAAKPAAQKSAATVEKTQPDQPGLLSRFFGALKKMFAGEEAQPEQPKEEPKATKP
ERQQDRRKRQNNRRDRNDRNDRNDRSERRDNRSDNGEGREQREDNRRNRREKQQQNVEDR
EIRQQAGDESEKSKQRDDQQPRRERNRRRNDEKRQAQQEVKNLNREEPVEQQDGEQEERT
QVMPRRKQRQLTQKVRFATEATEESAVVADETSESATGTQLAKVDLPAVVENTVEQDENG
ENRDNAGMPRRSRRSPRHLRVSGQRRRRYRDERYPAQSPMPLAVACASPEMASGKVWIRY
PVARPEQVVEQQVVTEELIAPVAAVEEAVAEAAIVVEPQAIEVETPHAVTVETTHPEVIA
TPVDAAPQLIAEEDTVVAEEVAEEVQPAAAVEDTAEIVAETVTENVVQDVEIVAEPVRAA
EEVKAPEVKPEPVVSAPAFAHVATAPMTRAPAPEYVPETPRHSDWVRPAFNFEGKGSAGG
HSATHQATAPATRPRSVE
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatgttaatcaacgcaactcagcaagaagagttgcgtgtcgcccttgtggat
gggcagcgcctgtacgatctggatatcgaaagtcctggacacgaacagaaaaaagcgaac
atttacaaaggtaaaatcacccgcattgaaccaagccttgaagctgcatttgtcgattac
ggtgctgagcgtcacggttttctccctctgaaagaaatcgcccgcgaatatttccctgca
aactacaactcccatggccgtccaaacatcaaagatgttctgcgtgaaggtcaggaagtt
atcgttcagattgataaagaagagcgtggcaataaaggtgccgcactgactacctttatc
agcctggcagggagctatctggttctgatgccaaacaacccgcgcgcgggtggtatctct
cgccgtatcgaaggtgatgaccgtaccgagctgaaagaagcgctggctagtctcgaattg
cctgatggcatggggcttatcgtgcgtacagcaggcgtaggtaaatcagccgaagcattg
cagtgggacctgagtttccgtctgaagcactgggaagccatccagaaagcagcggaaagc
cgccctgctccattcctgatccaccaggaaagcaacgttatcgtgcgtgccttccgtgat
tacctgcgtcaggacatcggtgagattctgatcgataacccgaaagtgcttgagctggcg
cgccagcacattgccgcattgggtcgtccggatttcaccagcaaaatcaaactgtacacc
ggtgaaatcccgctgttcagccactatcagattgaatcccagattgagtcagcgttccag
cgtgaagtgcgtctgccatccggtggttctatcgttattgataccactgaagcgctgacc
gctatcgatatcaactccgcgcgtgcaacacgcggcggcgacatcgaagagactgccttc
aataccaaccttgaagccgctgatgaaatcgcccgccagctccgcctgcgcgacctgggt
ggtctgattgttatcgacttcatcgacatgaccccggttcgtcaccagcgcgcagttgaa
aaccgtctgcgtgaagcagtgcgtcaggaccgtgcgcgcatccagattagccatatctcg
cgtttcggtttgctggagatgtcccgtcagcgtctgagcccgtcactgggtgagtccagc
catcacgtctgcccgcgctgctccggcaccggtaccgtccgtgataacgaatctctgtcc
ctctctatcctgcgtctgatcgaagaagaagcgctgaaagagaacaccaaagaggttcat
gccattgtgcctgtgccaattgcgtcctacctgctgaacgaaaaacgtgcagcggttagt
gccatcgaagcacgtcagggtggtgttcgctgcattatcgtgccaaacgatcagatggaa
accccgcactatcatgtgctgcgtgtccgtaaaggcgaagagacaaccacgctcagctac
ctgctgccgaagctgcatgaagaagagatggctctgccttccgatgaagagcctgccgag
cgcaaattgcctgagcaacctgcgttagccacctttatcatgcctgaagcaccacctgaa
acggcgctggaaaaacctgctgcaaaacctgcagcacagaaatcagcagccacagtggaa
aaaacccaaccggatcaaccaggtcttctgagccgcttctttggcgcgttgaagaaaatg
tttgccggcgaggaagctcaaccagagcaaccgaaagaagagcctaaagcgaccaagcct
gagcgtcagcaggaccgtcgtaagcgtcagaacaatcgccgcgatcgtaatgaccgcaac
gaccgtaatgaccgcagcgagcgtcgtgacaaccgttcagacaacggtgaaggccgtgaa
caacgcgaagacaaccgtcgcaaccgtcgcgagaaacaacagcaaaatgttgaagatcgt
gaaattcgccagcaggcgggcgatgagtctgagaagagcaaacagcgtgacgaccagcag
ccacgtcgcgagcgtaaccgtcgtcgtaacgacgagaaacgtcaggcgcagcaggaagtc
aaaaacctgaaccgcgaagagcctgttgaacagcaggacggtgagcaggaagaacggact
caggttatgccgcgtcgcaagcagcgccagcttactcagaaagttcgcttcgccaccgaa
gctaccgaagagtcagccgttgtcgccgatgaaacaagcgagagcgcaaccggtacccaa
ctggcaaaagttgatctacctgctgtggtagaaaacacggttgagcaggatgaaaacggt
gaaaaccgcgataatgccggtatgcctcgccgttcacgtcgttctccacgccatctgcgc
gtcagcgggcagcgtcgccgtcgttatcgtgatgagcgctaccctgctcagtcaccaatg
ccattagccgtggcatgcgcatcacctgaaatggcatccggtaaagtctggatccgctac
ccggtcgctcgtccggagcaggttgtggaacaacaggtggtgacagaagagttgattgcg
ccagtcgcagcagtggaagaagccgtagctgaagcagccatcgtggttgaaccgcaagct
attgaggtagaaaccccgcatgccgtgacggtagaaaccacgcatccggaagtgattgcc
accccggttgatgctgcaccgcagctgattgctgaagaagataccgtagtggcagaagag
gtcgcggaagaagtacagcctgctgctgctgttgaagataccgctgaaatcgtggccgaa
accgtcactgaaaatgtggttcaggatgttgagattgtcgctgaacctgttcgtgcagcc
gaagaagtgaaagcacctgaggtgaaaccggagccggttgtgtctgcgccagcttttgcc
cacgtggcgacagctcctatgacgcgcgctccggcacctgagtacgtgcctgaaaccccg
cgtcacagtgactgggtacgccctgctttcaatttcgaaggcaaaggctcagcaggtggt
cacagtgcaacgcatcaggcgactgcaccggcgactcgcccgcgctctgtcgagtaa
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