Erwinia amylovora ATCC 49946: EAM_0187
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Entry
EAM_0187 CDS
T01199
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
eay
Erwinia amylovora ATCC 49946
Pathway
eay03420
Nucleotide excision repair
eay03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EAM_0187 (uvrD)
03430 Mismatch repair
EAM_0187 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eay03400
]
EAM_0187 (uvrD)
Enzymes [BR:
eay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EAM_0187 (uvrD)
DNA repair and recombination proteins [BR:
eay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EAM_0187 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
EAM_0187 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
AAA_30
UvrD_C_2
AAA_11
AAA_22
PhoH
Motif
Other DBs
NCBI-ProteinID:
CBJ44862
LinkDB
All DBs
Position
229682..231844
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSDLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMEVENCSPHSIMAV
TFTNKAAAEMRHRIEQLIGTRQGGMWIGTFHGLAHRLLRAHHLDARLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPARQGMWYINGKKDEGLRPMHIESYGNPIEQTWLRIYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILNHYRERFTNILVDEFQDTNNIQYAWIRMLAGDT
GKVIIVGDDDQSIYGWRGAQVENIQRFLQDFPAAETIRLEQNYRSTNNILKAANTLIANN
NGRLGKELWTEDSDGEPIAIYCAFNELDEARFVVNRIKVWMEKGGALNDCAILYRSNAQS
RVLEEALLQTSMPYRIYGGMRFFERQEIKDSLAYLRLISNRNDDAAFERVVNTPTRGIGD
RTLDVVRQTARERQLTLWQTARALLQEKALAGRAASALQRFTELVDSLAQETSDMPLHVQ
TDRVIKDSGLWLMYEQEKGEKGQARIENLEELVNATRQYSYQDEDEDLMPLQAFLSHAAL
EAGEGQADKWQDAVQLMTMHAAKGLEFMQVFIVGMEEGMFPSQMSLEEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPVECVEEVRLRASVSRPVSHQRMG
TPVAKNDSGFTLGQRVHHAKFGEGTIVNLEGSGEHSRLQVAFQGQGIKWLVAAYAKLEAM
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttctgacctgctcgatagcttgaatgacaaacaacgtgaagccgtggccgcg
ccgcgcagtaatctgctggtgctggccggagcaggcagtggtaaaacgcgcgtgctggtg
caccgcattgcctggctgatggaggtagaaaactgttcgccgcattcgatcatggcggtg
accttcaccaataaggcggcggcggaaatgcgccatcgtattgagcagctgatcggcacc
cgccagggcgggatgtggatcggcaccttccacgggcttgcgcatcgcttgctgcgtgcg
caccatctcgatgccagactgccgcaggacttccagatccttgacagtgaagaccagctg
cgcctgctgaaacgcctgattaaggcgatgaatctggatgagaagcagtggccggcccgt
caggggatgtggtacatcaacggcaagaaagacgaaggcttgcgcccgatgcatatcgaa
agctacggcaacccgattgagcaaacctggctgcgtatttaccaggcctaccaggaggcg
tgcgatcgcgccgggctggtggacttcgccgagctgctgctgcgcgcccacgagctgtgg
ctgaacaaaccgcatatccttaaccactatcgtgaaaggttcaccaacatcctggtagac
gagttccaggataccaacaatatccagtacgcctggatccgcatgctggccggtgacacg
gggaaagtgatcatcgttggtgacgacgatcagtcgatttacggctggcggggcgcgcag
gtggaaaatattcagcgcttcctgcaggacttcccggcggcagaaaccatacgccttgag
cagaactatcgttcgaccaacaatatcctcaaagccgcgaataccctgattgccaacaat
aatggtcgtctgggcaaagagctgtggactgaagacagcgacggcgagccaatcgcgatt
tactgcgcctttaacgagctggatgaagcgcgttttgtcgtcaatcgtatcaaggtatgg
atggaaaagggcggcgcgctaaacgactgcgccatcctgtaccgcagcaacgcccagtcg
cgcgtgctggaagaagcgctgttacaaaccagcatgccgtaccgtatttatggcggtatg
cgcttcttcgaacgccaggaaatcaaggattctctcgcctatttgcgcctgatctccaac
cgtaatgacgatgcggcctttgagcgcgtggtgaataccccgacgcgcggtatcggcgac
cgcacgcttgatgtggtgcgccagacggcgcgtgagcgccagctaaccttatggcaaacc
gcccgggcgctgctgcaggaaaaagcgctggccgggcgtgcggcttccgctttgcaacgc
ttcaccgaactggtggactcgctggcacaggaaaccagcgacatgccgctgcacgttcag
acggatcgagtgatcaaagactccggcctgtggctgatgtatgagcaggagaaaggcgag
aagggccaggcgcgtatcgaaaaccttgaagaactggtcaatgccacccgccagtacagc
tatcaggatgaggatgaagacctgatgccgctgcaggcattcttgtctcatgccgcgctg
gaagcgggggaaggccaggccgataagtggcaggatgccgtgcagctgatgaccatgcac
gctgcaaaggggcttgagtttatgcaggtgtttatcgtcggcatggaagaaggcatgttt
cccagccagatgtcgcttgaagagggcggacggctggaagaagagcgccgtcttgcctat
gtcggcgtgacgcgggcgatgcagaaactgacgctgacctacgccgaaacccggcggctg
tatggtaaggaagtctatcaccggccgtcgcgctttattggcgaactgccggtggagtgc
gtggaagaggtgcggctgcgcgccagcgtcagtcggccggtcagtcatcagcgcatgggc
acgccggtggcgaaaaacgacagcggttttacccttggccagcgggtgcatcatgcgaaa
tttggcgaaggcaccatcgtcaatctggagggcagcggcgagcacagccgtttgcaggtg
gcgttccagggccagggcattaaatggctggtcgccgcgtatgccaaactggaagcgatg
tga
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