Erwinia amylovora ATCC 49946: EAM_0191
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Entry
EAM_0191 CDS
T01199
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
eay
Erwinia amylovora ATCC 49946
Pathway
eay03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eay00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EAM_0191 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eay03019
]
EAM_0191 (recQ)
03400 DNA repair and recombination proteins [BR:
eay03400
]
EAM_0191 (recQ)
Enzymes [BR:
eay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EAM_0191 (recQ)
Messenger RNA biogenesis [BR:
eay03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EAM_0191 (recQ)
DNA repair and recombination proteins [BR:
eay03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EAM_0191 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
CBJ44866
LinkDB
All DBs
Position
234707..236539
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AA seq
610 aa
AA seq
DB search
MSTAAVINNEALADQVLRDTFGYQQFRPGQQTIIQESLNGRDCLVVMPTGGGKSLCYQIP
ALVRQGLTLVVSPLISLMKDQVDQLLANGVAAACLNSTQNREEQQNVMAGCRSGKVRLLY
IAPERLMMDNFLEQLTHCNPAMLAVDEAHCISQWGHDFRPEYGALGQLRQRLPDVPVMAL
TATADETTRNDIARLLQLNDPLIQISSFDRPNIRYTLVEKFKPTEQLLRYVQDQRGKCGI
IYCNSRAKVEDTAARLQSRGLSVGAYHAGMDNAHRAQVQEAFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEALLLYDPADMAWLRRCLEEKKQGPL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQQACDNCDICLDPPRRYDGLVEAQKAL
SCIYRVGQRFGMGYIVEILRGANNQRIRDMQHDKLPVYGIGRDQNHEHWTSVLRQLIHLG
LVTQNIAMYSALQLTEAARPVLRGEVSLLLAVPRLVSVKTRGSSQKSFGGNYDRKLFAKL
RKLRKAIADEDNLPPYVVFNDATLIEMAEQMPITASEMLSVNGVGHKKLERFGKPFLLMI
KEHIDGGDDE
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
gtgtctacggcagcagtcatcaataacgaagcgctggcagaccaggtattgcgtgatacc
ttcggctatcagcagtttcgcccgggacaacaaaccatcatccaggaatcgctgaacggg
cgtgactgcctggtggtgatgccaaccggtgggggcaaatcgctctgctatcaaattccg
gcgctggtgcgtcagggactgacgctggtggtgtcaccgctgatctcgctgatgaaagac
caggtcgatcagctgctggccaacggggtagcggcggcctgtctcaattcgacgcaaaat
cgtgaagaacagcagaacgtgatggcaggctgccgcagcggaaaagtgcgtttgctctac
attgctcctgaacgcctgatgatggacaacttccttgagcagctgacgcactgcaacccg
gcgatgctggcggtggatgaagcccactgtatctcgcagtggggccatgatttccgcccg
gaatatggcgctttgggccagctgcgtcagcggctgcctgacgtcccggtgatggcgtta
acggcgacagcggatgagaccacccgcaacgatattgcccgcctgttacagcttaatgac
ccgctgatccagatcagcagtttcgaccggccgaatattcgctacacgctggtggagaaa
tttaagccgaccgaacagctgctgcgctacgttcaggaccagcgcggcaagtgtggcatt
atttactgcaacagccgggcgaaagttgaagataccgctgcccgcctgcaaagccgtggt
ttgagcgtcggggcttatcacgccggaatggataacgcgcaccgcgcccaggtgcaggaa
gcctttcagcgcgacgacctgcaaattgtggtggcgacggtggcatttgggatgggcatc
aacaaacccaacgtgcgctttgtggttcatttcgatatcccgcgcaatatcgagtcctat
taccaggaaaccggccgtgccgggcgcgatggcctgcctgctgaagccctgctgctgtac
gatccggccgatatggcctggctgcgccgctgtctggaggagaaaaaacaggggccactg
caggatattgaacgtcataagctgaatgcgatgggggcctttgccgaggcacagacctgc
cgacgtctggtgctgctgaactatttcggtgaagggcgtcagcaggcgtgcgataactgc
gatatttgcctggatccgccgcgtcgctacgatggcctggtcgaagcgcaaaaagcgctt
tcctgcatctatcgcgtcggccagcgctttggcatgggctatatcgttgagatcttgcgc
ggtgccaacaaccagcgtattcgcgatatgcagcacgataagctgccggtttacggcatc
gggcgcgatcaaaaccatgaacactggaccagcgtgctgcgccagctgatccacctcggt
ttggtgacgcagaatatcgctatgtactcggctctgcaattaaccgaagccgcccgtccg
gtgctgcgcggtgaagtgtccctgttgctggccgtgccgcgcctggtcagtgtgaaaaca
cgcggcagcagccagaaatccttcggcggcaactacgatcgcaagctgtttgccaaattg
cgcaaactgcgcaaagcgattgccgatgaagacaacctcccgccctacgtggtgtttaac
gacgcgacgctgattgaaatggcggagcagatgccgatcaccgcatcagagatgctgagc
gttaacggcgtcgggcacaaaaaactggagcgctttggcaagccgttcctgttgatgata
aaggaacatatcgacggcggtgatgacgaataa
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