| Entry |
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| Symbol |
rpoC
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| Name |
(GenBank) DNA-directed RNA polymerase beta' subunit
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| KO |
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| Organism |
eay Erwinia amylovora ATCC 49946
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:eay00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EAM_0229 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:eay03021]
EAM_0229 (rpoC)
03400 DNA repair and recombination proteins [BR:eay03400]
EAM_0229 (rpoC)
Enzymes [BR:eay01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EAM_0229 (rpoC)
Transcription machinery [BR:eay03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EAM_0229 (rpoC)
DNA repair and recombination proteins [BR:eay03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EAM_0229 (rpoC)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
284995..289218
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| AA seq |
1407 aa
MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPTAHIWFLKSL
PSRIGLLLDMPLRDIERVLYFESYVVIEGGMTNLEKRQILTEEQYLDALEEFGDEFDAKM
GAEAIQALLKNMDLEQECETLREELNETNSETKRKKLTKRIKLLEAFVQSGNKPEWMILT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPY
LRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKMVEREESVVWDILDEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA
RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTRDCVNAKGEGMVLTGPKEAERVYRAG
LASLHARVKVRITEHEKNEHDEWVAKTSIVDTTIGRAILWMIVPKGLPYSIVNQALGKKA
ISKMLNTCYRILGLKPTVIFADQTMYTGFAYAARSGASVGIDDMVIPEKKVEIITEAEAE
VAEIQQQFQSGLVTAGERYNKVIDIWAAANERVAKAMMENLSTEVVINRDGVEERQVSFN
SIFMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVVTEDDCGTHEGIMMTPVIEGGDVKEPLRERVL
GRVTAEDVLKPGTADILLPRNTLLHEQQCDLLEEHSVDSLKVRSVVSCETDFGVCAHCYG
RDLARGHIINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGTLKL
INAKSVTNSAGKLVVTSRNTELKMIDEFGRTKESYKVPYGSTMAKGDGEQVAAGETVANW
DPHTMPVITEVSGFIRFTDMIDGQTITRQTDDLTGLSSLVILDSAERTAGGKDLRPALKI
VDANGNDVMIPGSDMPAQYFLPGKAIVQLEDGIKISSGDTLARVPQESGGTKDITGGLPR
VADLFEARRPKEPAILAEISGIISFGKETKGKRRLVITPIDGSDPYEEMIPKWRQLNVFE
GERVERGDVVSDGPESPHDILRLRGVHAVTRYITNEVQEVYRLQGVKINDKHIEVIVRQM
LRKATIESAGSSDFLDGEQVEFSRVKISNRDLESNGKIAATFVRDLLGITKASLATESFI
SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRKAAGEAPV
VPQVTADEASASLAELLNAGLGGRDDE |
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| NT seq |
4224 nt +upstreamnt +downstreamnt
gtgaaagacttacttaagtttctgaaagcgcaaactaagaccgaagagtttgatgcgatc
aagatcgctctggcctcgccagatatgatccgttcatggtcttttggtgaagttaaaaag
ccggaaaccattaactaccgtacgttcaaacctgaacgtgacggccttttctgtgcgcgt
attttcgggccggtaaaagactatgagtgcctgtgcggtaagtacaagcgcctgaagcat
cgcggtgtgatctgtgagaagtgtggcgttgaagtcacgcagactaaagttcgccgtgag
cgcatgggtcacattgaactggcctcgccaaccgcgcacatctggttcctgaaatcgctg
ccttcgcgcatcggtttgctgctggatatgccactgcgtgacatcgaacgcgtcctgtac
ttcgagtcttacgtggtgattgaaggcggcatgaccaaccttgaaaagcgccagatcctg
actgaagagcagtatcttgacgcgctggaagagtttggtgacgaattcgacgctaaaatg
ggtgcggaagcgatccaggccctgttgaaaaacatggacctggaacaagagtgtgaaact
ctgcgtgaagagttgaacgaaaccaactccgaaaccaagcgtaaaaagctgaccaagcgt
atcaagctgctggaagcgtttgtccagtctggcaacaagccagagtggatgatcctgacc
gtgctgccggtactgccaccggatctgcgtccgctggtgccgctggacggcggtcgtttc
gccacctcagatctgaacgatctgtatcgtcgcgttatcaaccgtaacaaccgtctgaaa
cgcctgctggatctggctgcgccggatatcatcgtacgtaacgaaaaacgtatgctgcag
gaagcggtcgatgcgctgctggataacggccgtcgcggccgtgcgatcaccggttctaac
aaacgtccgctgaaatctttggccgatatgatcaaaggtaaacaggggcgtttccgtcag
aacctgctgggtaaacgtgtcgactattccggtcgttcggttatcaccgtaggtccatac
ctgcgtctgcatcagtgcgggctgccgaagaaaatggcgctggagctgttcaaaccgttt
atctacggcaagctggaactgcgtggtcttgctaccaccatcaaagccgccaagaaaatg
gttgagcgcgaagaatccgtcgtctgggatatcctggatgaagtgatccgcgagcatccg
gtattgctgaaccgtgcacccaccctgcaccgtttggggatccaggcgttcgaaccggta
ctgatcgaaggtaaagctatccagctgcacccgctggtttgtgcggcctataacgccgac
tttgatggcgaccagatggccgttcacgtaccgctgacgctggaagcccagctggaagcg
cgtgcgctgatgatgtctaccaacaacatcctgtctccggcgaacggtgaaccgatcatc
gttccttctcaggacgttgtactgggtctttactacatgacccgcgactgcgttaacgcc
aaaggcgaaggcatggtgctgaccgggccgaaagaagcggaacgcgtttaccgcgccggc
ctcgcctcgctgcacgctcgcgttaaggtgcgtatcaccgaacacgagaaaaatgagcat
gatgaatgggttgctaaaaccagcatcgtcgacaccaccattggccgcgcaatcctgtgg
atgatcgtgccaaaagggctgccttactctatcgtcaaccaggcgctgggtaagaaagct
atttctaagatgctgaacacctgttaccgcatcctgggactgaagccgaccgttatcttt
gctgaccagacgatgtacaccggttttgcctatgcggcacgctcgggtgcgtctgtgggt
atcgacgacatggttatcccagagaagaaagtggaaatcatcaccgaagcggaagcggaa
gtggctgaaatccagcagcagttccagtctggtctggttaccgctggcgaacgctataac
aaagtgatcgatatctgggctgcggccaacgaacgcgttgctaaagcaatgatggaaaac
ctctctaccgaagtcgtgattaaccgcgacggcgtggaagagcgtcaggtttccttcaac
agcatctttatgatggctgactccggtgcgcgtggctctgcggcgcagatccgtcagctg
gccggtatgcgtggcctgatggcgaaaccagatggctcgatcatcgaaacgccaatcacc
gccaacttccgtgaaggtctgaacgtactccagtacttcatctccacgcacggcgcgcgt
aaaggtttggcagataccgcactgaaaacagctaactccggttatctgactcgtcgtctg
gttgacgtcgcgcaggacctggtggtgactgaagatgactgtggtacgcacgaaggcatc
atgatgactccggttatcgaaggcggcgacgtgaaagagccgctgcgtgagcgtgtactg
ggtcgtgtgaccgcagaagacgtgctcaagccgggtactgctgacatcctgctgccacgc
aacaccctgctgcacgaacagcagtgtgacctgttggaagagcactctgttgacagcctg
aaagtgcgctcggtggtcagttgcgaaacggacttcggcgtgtgcgcgcactgctacggt
cgtgatctggcgcgtggccacatcatcaacaaaggtgaggccatcggcgttatcgcagca
cagtccatcggtgagccgggtacacagctgacgatgcgtaccttccacatcggtggtgcg
gcatcgcgtgcggcagctgaatccagcattcaggtgaagaacaaaggtacgctgaagctg
atcaacgccaagtcggtgaccaactccgcaggtaagctggttgttacttcacgtaacacc
gagctgaaaatgatcgatgaatttggtcgtaccaaagagagctacaaagttccttatggt
tctaccatggcgaaaggtgacggcgagcaggttgcagcgggcgaaaccgtcgcaaactgg
gatccacacaccatgccggttatcaccgaagtgagcggtttcattcgcttcaccgacatg
attgatggccagaccattacccgccagacggatgacctgaccggtttgtcttctctggtg
attctggacagtgcggaacgtactgccggtggtaaagatctgcgtccggcgctgaaaatc
gttgatgctaacggcaatgacgtgatgatcccaggatcggatatgcctgctcagtacttc
ctgccgggtaaagcgattgtccagctggaagacggcatcaagatcagctcgggtgatacc
ctggcgcgtgttccacaggaatccggcggtaccaaggatattaccggtggtctgccacgc
gttgccgacctgttcgaagcccgtcgtccgaaagagccggcaattctggctgagatcagc
ggcatcatttccttcggtaaagaaaccaaagggaaacgtcgtctggtgatcaccccgatc
gacggtagcgatccgtacgaagagatgatcccgaaatggcgtcagctgaacgtgttcgaa
ggtgaacgcgtagagcgtggtgacgtggtttccgatggcccggaatcgccacatgacatt
ctgcgtctgcgcggcgtgcatgcggtgacgcgttatatcactaacgaagtgcaggaagtt
taccgcctgcagggcgttaagattaacgataagcacatcgaagttatcgtgcgccagatg
ctgcgtaaagcaaccatcgaaagcgcgggaagctctgacttcctcgacggtgagcaggtt
gaattctctcgcgttaagatctctaaccgcgatctggaatccaatggcaaaatcgctgcg
accttcgtgcgcgatctgctgggtatcaccaaggcttctctggcaaccgagtcgtttatc
tctgcggcctcgttccaggaaaccacgcgcgtgctgaccgaagcagccgttgcgggcaaa
cgcgacgaactgcgcggcctgaaagagaacgttatcgtgggccgtctgatcccagccggt
accggttacgcttatcatcaggatcgtatgcgccgtaaagcagcgggtgaagcaccagtg
gttccgcaggtcaccgcggatgaagcttctgccagcctcgccgagttgctgaacgccggt
ctcggtggtcgtgacgacgagtaa |
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