Erwinia amylovora ATCC 49946: EAM_0836
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Entry
EAM_0836 CDS
T01199
Symbol
ldcC
Name
(GenBank) lysine decarboxylase
KO
K01582
lysine decarboxylase [EC:
4.1.1.18
]
Organism
eay
Erwinia amylovora ATCC 49946
Pathway
eay00310
Lysine degradation
eay01100
Metabolic pathways
eay01110
Biosynthesis of secondary metabolites
eay01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
eay00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
EAM_0836 (ldcC)
Enzymes [BR:
eay01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.18 lysine decarboxylase
EAM_0836 (ldcC)
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Motif
Other DBs
NCBI-ProteinID:
CBJ45511
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All DBs
Position
943205..945379
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AA seq
724 aa
AA seq
DB search
MNIIAIMGPHRVFYKDEPVRELDVALTRQGFHTVYPQGAGDLLKLVEHNPRICGVVFDWD
EYSLDLCREINQLNEYLPLYAFINTDSTMDVGVNEMRMAIWFFEYALNAGEEIAQRIRQY
TDEYIDTITPPLTKALFNYVKEGKTTFCTPGHMAGTAFQKSPVGSLFYDFFGANTLKADI
SISVSELGSLLDHTGPHLEAEEYIARTFGAEQSYMVTNGTSTANKIVGMYAAAAGSTVLI
DRNCHKSLTHLLMMSDIIPVWLKPTRNALGILGGIPKREFSKESIALKVAQTPRASWPVH
AAITNSTYDGLLYNTQYIKETLEVPSIHFDSAWVPYTNFHPIYQGLSGMSGERTPGKVIY
ETQSTHKLLAAFSQASLIHIKGDYDEQTFNEAYMMHTTTSPNYAIVASIETAAAMLRGNS
GKRLINRSVERALHFRREVQRLREESDGWFFDIWQPDGVDEPECWAIQPGDEQWHGFRDA
DADHMYLDPIKVTILTPGMSEMGEMAEEGIPAALVAKFLDERGVVVEKTGPYNLLFLFSI
GIDKTKAMSVLRGLTEFKRAYDLNLRVKNMLPDLYAQDPDLYRNMRIQTLAHGIHNLIRQ
HDLPRLMLQAFATLPEMKLTPHQMFQQQVKGNVETVDISQLVGRVSANMILPYPPGVPLV
MPGEMITEESRPVLDFLLMLCTIGRHYPGFETDIHGAKLTEEGQYLVRVLTHDGEVRAAG
NAGV
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgaatattattgccatcatgggcccgcatcgcgtcttctacaaagatgagcctgtccgt
gagctggatgtcgcattaacacgacaggggttccacaccgtctatccgcagggtgccgga
gatttgctgaagcttgtagagcataatccgcgaatttgtggcgtggtatttgactgggat
gagtacagtctcgatctctgtcgtgagatcaaccagctgaatgaatatctgccgctttac
gcgtttatcaacaccgattcgacgatggatgttggcgttaacgagatgcgcatggcgatc
tggttttttgagtatgcgcttaatgcaggtgaagagattgcccagcgtatccgccaatat
accgatgaatacatcgataccatcacgccgccgctgaccaaagcgctgttcaactacgtc
aaagagggaaaaacaacgttttgtactccggggcatatggcgggtacggcatttcagaaa
agcccggtgggcagcctgttctatgacttctttggtgccaatacgctgaaagcggatatt
tcgatttcggtcagtgaattaggttcgttgctcgaccacaccggcccccatcttgaggcg
gaagagtatatcgcgcgcacctttggcgcggagcaaagctacatggtcaccaatggcacc
tccaccgccaacaagattgtcggcatgtacgcggcggcggcaggcagtaccgtgttgata
gaccgcaactgccataaatccctgacccatctgctgatgatgagcgacattattcccgtc
tggctgaagccaacgcgcaatgcgctggggatccttggcggcattccgaagcgagaattt
agcaaagagagcattgcgctcaaggtggcacaaacaccgcgcgccagctggccggtacat
gcggcgatcactaattcgacctatgacgggctgttgtataacacgcaatacatcaaagaa
acgctggaggtgccgtcgatccacttcgactcggcgtgggtgccttacacgaatttccac
ccgatctatcagggattgagcggcatgagcggggaacgcacgccgggtaaggtgatttac
gagacgcagtcgactcacaaattgctggccgcgttctctcaggcttcgctgatccacatc
aaaggtgactacgatgaacaaaccttcaatgaagcctatatgatgcataccaccacttcg
cctaactacgccatcgtcgcctctatcgaaacggcggcggcgatgctgcgcggtaactct
ggcaaacgactgattaaccgttcggtagagcgcgcgctgcatttccgccgtgaagtacag
cggctgcgtgaagagtcagacggctggttcttcgatatctggcagccggacggggttgat
gagccggaatgttgggcgatccagcccggtgatgagcagtggcatggtttccgtgatgcc
gatgccgatcatatgtatctggatccgatcaaagtgaccatcctgacgcccggcatgagc
gagatgggtgagatggcggaagagggcattccggcagcgttggtagccaaattccttgac
gaacgtggcgtggtggtggaaaagaccgggccgtataatctgctgtttttgttcagtatt
ggcatcgataaaaccaaagcaatgagcgtactgcgcggactgaccgagtttaaacgcgct
tacgatctcaatctgcgggtaaaaaacatgctgccggatctgtacgcacaggatcctgac
ttatatcgtaatatgcgcattcagactctggctcacggcatccacaacctgatccgccaa
cacgatctgccacgcctgatgctacaagctttcgccacgctgccggaaatgaagttgacg
ccgcatcagatgtttcagcagcaggtaaagggcaacgtggaaaccgtcgatatcagccag
ctggtcgggcgcgtgtcggccaacatgatcttgccttatccccccggcgtgccgctggtg
atgccgggggaaatgatcactgaagaaagtcgcccggtgctcgatttcttactgatgctg
tgtaccatcggcagacattatcccggctttgaaaccgatattcacggtgcgaaactgacc
gaagaggggcagtatctggtgcgggtgctgactcacgatggcgaagtgcgggctgccgga
aatgcgggggtttaa
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