Erwinia amylovora ATCC 49946: EAM_0948
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Entry
EAM_0948 CDS
T01199
Symbol
sbcD
Name
(GenBank) exonuclease subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
eay
Erwinia amylovora ATCC 49946
Brite
KEGG Orthology (KO) [BR:
eay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eay03400
]
EAM_0948 (sbcD)
DNA repair and recombination proteins [BR:
eay03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EAM_0948 (sbcD)
Archaeal homologous recombinant proteins
EAM_0948 (sbcD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
CBJ45623
LinkDB
All DBs
Position
complement(1054467..1055690)
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AA seq
407 aa
AA seq
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MRIIHTADWHLGQFFYTKSRAAEHQAFLDWLLEQAEAQQADAIIVAGDIFDTGTPPSYAR
ELYNRFVVKLQPTRCQLVVLGGNHDSVATLNESRELLACLNTRVIAAACDDIRQQVLVLN
RRDGQPGALLCAIPFLRPRDILRSQSGQSGREKQQSLLEAISEHYQRCWQQALAQRDALG
LALPIIATGHLTTMGVTKSDAVRDIYIGTLDAFPADCFPPADYIALGHIHRAQRIADSEH
IRYSGSPIPLSFDELGKAKSVMRVDFSAGKLSEVTALPIPLFQPMQMIKGSLEQIEQQLA
LLVPDAQGKTTWLDIEIVTDAYLSDHQRRIQELTAALPVEVVLLRRSREQREQVIARQNN
ETLSELSVEEVFARRLGSEPEQPERLERVRALFAQTLEAVRHEEQPS
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcattcatacggccgactggcatctcggccagtttttctacaccaaaagccgg
gcggccgagcatcaggcttttctcgactggctgctggaacaggcagaagcgcagcaggcc
gatgcgattatcgttgcgggcgatatcttcgataccggcaccccgccgagttacgcccgt
gagctatacaaccgctttgtggtcaagttgcagccaacccgctgccagctggtggtgctg
ggcggcaatcacgattcggtcgccacgctgaatgagtcgcgtgagctgctggcctgtttg
aatacccgggtgattgccgcagcctgtgacgatatccgtcagcaggtgctggtgctgaac
cgccgcgacggccagccgggcgccctgctgtgcgccattccgtttttacgtccgcgtgat
attttgcgcagccagagcgggcagtcggggcgtgaaaaacagcagagcctgctggaagcc
atcagcgaacactatcagcgctgctggcagcaagcgctggcgcagcgcgatgctctcggt
ttagcgctaccgattatcgcgaccggtcatctgaccacgatgggcgtgaccaaaagcgac
gcggtacgcgatatctatatcggcacgctggacgccttcccggccgactgctttcccccg
gcggactatatcgcccttggccatatccaccgcgcccagcgcatcgctgacagcgagcat
atccgctacagcggctcgccgatcccactcagttttgacgaactgggcaaggctaaaagc
gtgatgcgcgttgatttcagtgcaggcaagcttagcgaggtgaccgcgctgccgatcccg
ctgtttcagccgatgcagatgatcaaaggctcactggaacagattgagcagcagctggca
ctgctggtgcctgatgcacagggcaaaaccacctggctggatattgaaatcgttaccgat
gcttaccttagcgaccatcagcgccgcatacaggaactgaccgccgcgctgccggtggaa
gtggtactgctgcgccgcagccgcgaacagcgtgagcaggtgatagcacgccagaataat
gaaaccctgagtgaactgagcgttgaagaggtgtttgcacggcggctgggatcagaaccg
gaacagccggagcggctggaacgcgtgcgcgcgctgtttgcgcagacgctggaagcggtg
cgccatgaggagcagccatcatga
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