Erwinia amylovora ATCC 49946: EAM_0995
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Entry
EAM_0995 CDS
T01199
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
eay
Erwinia amylovora ATCC 49946
Brite
KEGG Orthology (KO) [BR:
eay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eay03032
]
EAM_0995 (hupB)
03036 Chromosome and associated proteins [BR:
eay03036
]
EAM_0995 (hupB)
03400 DNA repair and recombination proteins [BR:
eay03400
]
EAM_0995 (hupB)
DNA replication proteins [BR:
eay03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
EAM_0995 (hupB)
Chromosome and associated proteins [BR:
eay03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
EAM_0995 (hupB)
DNA repair and recombination proteins [BR:
eay03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
EAM_0995 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Arteri_nsp7a
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
CBJ45670
LinkDB
All DBs
Position
1104985..1105257
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSQLIDKIAAEADISKAAAGRVLDAFIGSVTESLQAGDEVALVGFGTFSVRERAERVG
RNPQTGKEITIAAGKVPGFRAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataagtcacagttgatcgacaaaattgctgcagaagctgatatttctaaagccgca
gcgggacgtgtattggatgcttttatcggttctgtaacagaatctttgcaggccggcgac
gaagtggcgctggttggtttcggtactttctcggtacgcgaacgtgctgaacgcgttggc
cgcaacccacagacgggtaaagaaattaccattgcagcaggaaaagtaccgggcttccgt
gccggtaaagcgttaaaggacgccgtaaactaa
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