Erwinia amylovora ATCC 49946: EAM_1216
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Entry
EAM_1216 CDS
T01199
Symbol
uvrB
Name
(GenBank) excision nuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
eay
Erwinia amylovora ATCC 49946
Pathway
eay03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
eay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EAM_1216 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eay03400
]
EAM_1216 (uvrB)
DNA repair and recombination proteins [BR:
eay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EAM_1216 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EAM_1216 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
UB2H
AAA_30
DUF87
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CBJ45891
LinkDB
All DBs
Position
1322305..1324329
Genome browser
AA seq
674 aa
AA seq
DB search
MSKVFKLNSEFKPAGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTVANVIADLNRPT
MVLAPNKTLAAQLYGEMKEFFPDNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTRGMVIDQRAILRRLAELQ
YARNDQAFQRGTFRVRGEVIDIFPAESDDYALRVELFDEEVERLSIFDPLTGQIESVIPR
YTIYPKTHYVTPRERLLQAMEEIKEELVERKKVLLDNNKLLEEQRLSQRTQFDLEMMNEL
GYCSGIENYSRYLSARGPGEAPPTLFDYLPADGLLVIDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGNYELEKSGGEVIDQVVRPTGLLD
PIVEVRPVGTQVDDLLSEIRQRVAINERVLVTVLTKRMAEDLTEYLTEHGERVRYLHSDI
DTVERVEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNLNGKAILYGDKITPSMARAIGETERRREKQQLHNQEHGIVPQGLNKKISDILELG
QGLAKNKAKPRNMKGRSIVEDDPAFVDLSPLGLQKRIHQLEAQMQQHAQNLEFEEAAQVR
DQLHQVRELFIAAS
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagtcttcaaactcaactccgaatttaaacccgctggcgatcagccggaggct
atccgtcgcctggaagaggggctggaagacggtctggcgcatcaaaccctgctcggcgtg
accggttcgggtaaaacctttaccgtggcaaatgtcattgccgacctgaatcgcccaacg
atggtgctggctccgaacaaaacgctggcggcgcagctgtacggcgaaatgaaagagttt
tttccggataatgcggtagagtatttcgtctcttattacgactactatcagccggaagct
tacgttcccagttcggacacctttatcgaaaaagatgcttcggtgaatgaacacatcgag
cagatgcgcctgtcggccaccaaagcgctgctggaacggcgtgacgtggtggtggtggca
tcagtatcggcgatttacggcctcggtgaccccgatctctatctgaaaatgatgctgcac
ctgacgcgcggcatggtgattgaccagcgtgccattctgcgccggctggcggagctgcaa
tatgcgcgcaacgaccaggccttccagcgcggtacgttccgcgtacgcggggaggttatc
gatatcttcccggcggagtctgatgattatgcgctgcgcgtggagctgttcgacgaagag
gtagaacggctgtccatttttgatccgctgaccggtcagatcgaatcggtgatcccgcgg
tataccatctatcccaaaactcactacgtgacgccgcgtgagcgcctcctgcaggcgatg
gaagagatcaaagaagagctggtggaacggaaaaaggtgctgctggataacaacaaactg
ctggaagagcagcgcctgagtcagcgcacccagtttgatcttgaaatgatgaacgagctg
ggctactgctccgggattgaaaactactcgcgctatctgtccgctcgcgggccgggcgaa
gcgccccccacgctgtttgactatctgcccgccgacggcctgctggtgattgatgaatcc
cacgtcactattccgcaaattggcggcatgtaccgtggcgaccgggcgcgcaaagaaacg
ctggtggagtacggtttccgtctgccgtcagcgctggataaccgcccgatgaagtttgaa
gagtttgaagcgcttgcgccgcagactatctacgtttccgccacgccgggaaattacgaa
ctggagaaatcgggtggcgaggtgatcgaccaggtggtgcgtcctaccggcctgctcgac
ccgatcgttgaagtgcgtccggtgggaactcaggtggacgatctgctctctgaaatccgc
cagcgcgtggcaattaacgaacgcgtgctggtcacggtgctgaccaaacgcatggcggag
gatttaaccgaatacctcacagagcacggtgagcgggtgcgctatctgcattcggacatt
gataccgtagagcgcgtggaaattattcgcgatctgcgtctgggtaagtttgacgtgctg
gtggggatcaacctgctgcgtgaagggctggatatgcctgaagtgtcgctggtggccatc
ctcgacgcggacaaagagggcttcttgcgttccgagcgttccctgatccagacgattggc
cgtgctgcgcgtaatcttaacggtaaggcgatcctctacggcgacaaaatcactccttcg
atggcgcgcgcgattggcgaaaccgaacgtcgccgtgaaaagcagcagctgcacaatcaa
gaacacggtattgtcccgcaaggcctgaacaagaaaatatccgatattcttgagctgggt
caggggctggcgaagaacaaagccaagccgcgtaacatgaaagggcgcagtattgtggaa
gacgatccggcctttgtcgatctgtcgccgctggggctgcaaaagcgcattcaccagctg
gaagcacagatgcagcaacatgcacagaatctggaatttgaagaggccgcccaggttcgc
gaccagctgcatcaggtgcgcgagctgtttatcgccgcgtcctga
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integrated database retrieval system
