Erwinia amylovora ATCC 49946: EAM_1341
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Entry
EAM_1341 CDS
T01199
Symbol
ihfB
Name
(GenBank) integration host factor beta-subunit
KO
K05788
integration host factor subunit beta
Organism
eay
Erwinia amylovora ATCC 49946
Brite
KEGG Orthology (KO) [BR:
eay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eay03032
]
EAM_1341 (ihfB)
03036 Chromosome and associated proteins [BR:
eay03036
]
EAM_1341 (ihfB)
03400 DNA repair and recombination proteins [BR:
eay03400
]
EAM_1341 (ihfB)
DNA replication proteins [BR:
eay03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
EAM_1341 (ihfB)
Chromosome and associated proteins [BR:
eay03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
EAM_1341 (ihfB)
DNA repair and recombination proteins [BR:
eay03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
EAM_1341 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-DNA_bdg
MDMPI_C
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
CBJ46016
LinkDB
All DBs
Position
1457143..1457430
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AA seq
95 aa
AA seq
DB search
MTKSELIERLAGQQSHIQAKVVEDAVKEMLEHMATTLSEGERIEIRGFGSFSLHYRAPRT
GRNPKTGDKVELEGKYVPHFKPGKELRDRANIYGG
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtcagaactgattgagaggcttgcaggccagcaatctcatattcaggcgaaa
gtcgttgaggatgcggtaaaagagatgctggagcacatggcaacgacgttgtcagagggt
gaacgcatcgaaatccggggatttggcagcttctctttgcactatcgggcacctcgtacc
ggccgtaacccgaagacgggtgacaaagtggagttggaaggtaaatacgttccacacttc
aagcccggaaaagagctgcgcgatcgcgccaatatatacggcggctga
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