Erwinia amylovora ATCC 49946: EAM_1353
Help
Entry
EAM_1353 CDS
T01199
Name
(GenBank) putative peptidoglycan binding protein
KO
K21470
L,D-transpeptidase YcbB
Organism
eay
Erwinia amylovora ATCC 49946
Brite
KEGG Orthology (KO) [BR:
eay00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
eay01002
]
EAM_1353
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
eay01011
]
EAM_1353
Peptidases and inhibitors [BR:
eay01002
]
Cysteine peptidases
Family C82
EAM_1353
Peptidoglycan biosynthesis and degradation proteins [BR:
eay01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
EAM_1353
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
CBJ46028
LinkDB
All DBs
Position
1472939..1474786
Genome browser
AA seq
615 aa
AA seq
DB search
MLLQKSSLIQALAVGCSLLSGLAVLPGAVAGTPPVFTAVVPAVSVTQSQQQITAALPHGI
MPFYLKNLVPLYASNHMQLMWQDPQALRLFEQQLAEVALSGVQPQFSQWVKQLTDPAIKG
LARDVVLSDAMLGYLQFTSSVPAKGEAWLYSTVPYRLEAPSTTVINQWQQALAQGNLDSF
VRSLAPRHPQYVRMHQALKSLLADTRPWPQIVDKQTLRPGQISNDVPALRDILQRNGMMS
AANEPARPPVEVVGAVNAPLVHDDDNAQPDTGLGGQGENSAVVSPSAKISGDASNAAAEP
NVFTGQAALGSPTNTYTPQLVEALKRFQRWQGLEADGAIGLRTRQWLNVSPPQRATLLAL
NIQRLRLLPDDMHNGIMVNIPNYSLAYYVNGREILSSRVIVGRPDRKTPLMRSALNNVVL
NPPWNVPTTLVRKDIVPKVKQDPMYLYKHGYTLLAGWSNEAEVVDPSMINWSMVSAASFP
YRIRQAPGPTNSLGRYKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNRASDLANL
LLHDVGWDDARISGTLKEGNTRFVPIRHRIPVNLYYLTAWVAEDGLPQFRTDIYNYDYTA
RSGTQVLARAGQLLL
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgttgctgcagaaatcatcactcattcaagcgcttgccgtcgggtgcagcctgctttcc
gggctggcagttttacccggcgcggtagcaggtacaccaccggttttcactgcggtggtg
ccggctgtcagcgtcacgcagagccagcagcaaattacggccgctttacctcacggtata
atgccgttttatctcaaaaaccttgtgccgctgtatgccagcaatcatatgcagctgatg
tggcaggatcctcaggcgctcaggctgtttgagcaacagctggctgaagttgccctttct
ggcgtacaaccgcagttttcccaatgggtaaaacagctgacggatcccgccattaaaggg
ttggcgcgggatgtggtgctatctgatgcgatgttgggttatctgcagttcacctccagc
gtgcccgctaaaggcgaagcctggctttacagcacggtgccgtaccggctggaagccccg
tcaacgacggtgataaaccagtggcagcaagcccttgcccagggcaacctcgatagcttt
gtgcgctctctggctccccggcatccgcagtatgtgcgcatgcatcaggcgctgaaatcc
ctgctggcggatacccggccgtggccgcaaattgtcgataagcagacgctgcgaccgggc
cagatcagcaatgacgtaccggccttgcgtgatatcctgcaacgaaacggaatgatgtca
gcggcaaatgagcctgccaggccaccggtggaagtggtaggtgcggtgaatgcccccctg
gtgcatgacgatgataatgcgcaaccggacacaggcttaggtggtcagggggaaaacagc
gccgttgtcagcccgtcggcgaagatatcaggcgatgcctccaacgcagccgcagagcca
aatgtctttaccgggcaggcggcgttgggcagcccgacgaatacctatacgccgcagctg
gtggaggcgctaaaacggttccagcgttggcaagggctggaggccgatggcgcgataggg
ctgcgcacccgccaatggctgaacgtctcgccgccgcagcgggcgacactgctggcgtta
aatattcagcgtctgcgcctgctgcccgatgatatgcacaacggcataatggttaacatc
ccaaattattcgctggcttactacgtcaatggccgtgaaatactgtcttcccgcgtcatc
gtcggccgcccggaccgtaaaacgccattgatgcgtagcgcgttgaataatgtcgtgctt
aacccaccgtggaacgtgccaaccacgctggttcgcaaagatattgtgccgaaggtgaaa
caggacccgatgtatctgtataaacacggttataccttgcttgcaggctggagtaacgaa
gcagaagtggttgacccttcaatgattaactggagtatggtttctgctgcttctttcccg
taccgcatccgccaggcgcctggccccaccaactcgctggggcgctacaagttcaatatg
ccaagctctgacgctatctacctgcatgacacgccaaatcatggcctgtttcagaaggat
attcgcgctctgagttccggctgcgtaagggtgaatcgcgcttccgatctggctaatttg
ctgctgcatgatgtgggctgggacgacgcgcgcatctccggcacgctgaaggaggggaat
actcgcttcgtgccgatccgccatcgtatcccggtcaacctctattatttgaccgcctgg
gtagcggaagatgggctgccgcagtttcgtacagatatttacaattatgactacaccgcg
cgttcaggtactcaggtgctggcgcgggctgggcaattgttgctctaa
DBGET
integrated database retrieval system
