Erwinia amylovora ATCC 49946: EAM_1855
Help
Entry
EAM_1855 CDS
T01199
Symbol
rnb
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
eay
Erwinia amylovora ATCC 49946
Brite
KEGG Orthology (KO) [BR:
eay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eay03016
]
EAM_1855 (rnb)
Enzymes [BR:
eay01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
EAM_1855 (rnb)
Transfer RNA biogenesis [BR:
eay03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
EAM_1855 (rnb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
PilZ
ODP
Motif
Other DBs
NCBI-ProteinID:
CBJ46530
LinkDB
All DBs
Position
1996819..1998762
Genome browser
AA seq
647 aa
AA seq
DB search
MFQDNPLLAQLKEKLHSQTPRVEGVVKGTEKGFGFLEVDAQKSYFIPPPFMKKVMHGDRV
SAVIQSDKDREVADPETLIEPFLTRFVGRIQKKDDRLSIIPDHPLLKEAIQCRPERNVQH
DFQAGDWAVAEMRRHPLKGDRTFYAELTEFITTAEDHLAPWWVTLSRHNLEREAPDIATP
QEMLDEQLEREDLTVLPFVTIDSASTEDMDDALYVEDVGNGVFKLIVAIADPTAYVAVNS
KLDAVAAERSFTNYLPGFNIPMLPRQLSDDICSLRPHERRPVLACRVTIAADGSPADDVQ
FFAAWIESHAKLAYDNVSDWLETGEACAWQPESEAIANQIRLLNRLCMARSEWRHAHALV
FKDRPDFRFQLGDKGEVLDIIAEHRRIANRIVEESMILANICAANVLRDKLGFGIYNVHH
GFDEVNAGQAAAVLANHGITADPLAIATLDGFRNLRRELDALPTQFLDSRIRRFQSFAEV
STTPGPHFGLGLEAYATWTSPIRKYGDMVNHRLLKAIIKGEESARPADELTLKMAERRRQ
NRMAERDVGDWLYSRFLQKAVGSDRRFSAEVIDVSRGGMRVRLQENGAVAFIPAPFIHAV
RDELVCSNENGSVQIKGEVVYRVTDLIEVTIAEVRMETRSIVARPLA
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgttccaggataacccgctgctcgcgcagcttaaagagaagctccactcccagacgccg
cgcgttgagggtgtggtaaaaggcactgaaaaaggtttcggcttcctggaagtcgatgca
cagaaaagttactttattcccccgccgttcatgaaaaaagtcatgcacggtgaccgcgtc
agtgcggttattcaaagcgataaggatcgcgaagttgccgatccggaaacgctgattgaa
ccgtttctgacgcgctttgtcggtcgtattcagaagaaagacgacaggctgtcgatcatt
cccgaccaccccctgctaaaagaggctattcagtgccgccctgagcgtaatgtgcagcat
gacttccaggctggcgactgggcagtggctgaaatgcgccgtcacccactgaagggtgac
cgtactttctatgccgaactgaccgaatttatcaccacagcggaagaccatctggctccg
tggtgggtcactctttcgcgccataatcttgagcgtgaagcgccggatatcgctacgccg
caagagatgctggatgaacagcttgagcgtgaagatcttaccgttctgccatttgtcact
atcgacagcgccagcaccgaagatatggacgacgcgctgtatgtggaagacgtgggtaac
ggtgtgtttaagctgatcgtcgctatcgcagatcccacagcctatgtagcggtgaacagc
aagctggatgcggtcgcggctgaacgctctttcactaactacctgcccggcttcaatatt
cccatgctgcctcgccagctgtcagatgatatctgttcgctgcgcccacatgagcgccgt
ccggtgctggcgtgccgcgtcactatcgccgcagatggttcacccgcagacgacgtgcag
ttctttgccgcgtggatcgaatctcacgctaaactggcgtatgacaatgtttctgactgg
ttagaaaccggggaagcatgcgcatggcagccggaaagtgaggcaattgccaaccagatc
cgcctgctaaaccgtctctgcatggcgcgcagcgagtggcgtcacgcgcatgccctggta
ttcaaagaccgcccagacttccgcttccagctgggtgataaaggcgaagtgctggacatt
attgccgaacaccgtcgcattgctaatcgcattgttgaagaatcgatgatcctggctaac
atctgcgctgccaatgtgctgcgtgacaagctgggctttggtatctataacgtccaccac
ggctttgatgaagtcaatgccgggcaggccgcggcggtactggcaaatcatggcataacc
gctgacccgctggcgattgcaaccctggatggtttccgcaatttgcgccgcgaactggat
gccctgccgactcagtttcttgacagccgtattcgccgcttccagtcatttgccgaagtc
agcaccacgcctggcccgcactttggtttaggccttgaggcatatgcaacctggacctcc
ccgatccgtaagtatggcgatatggttaatcaccgcctgctgaaagctatcatcaaaggg
gaagagagcgcacgtcctgccgacgaactcacgttgaagatggcggaacgccgtcgtcag
aaccgtatggctgaacgcgatgtgggtgactggctttactcgcgtttcctgcagaaagcg
gttggcagcgatcggcgttttagtgcagaagtgattgatgtctcccgtggcggcatgcgt
gtacgcctgcaggaaaacggtgcggttgcatttatccctgccccgtttatccatgccgta
cgtgatgaactggtgtgcagtaacgaaaatggcagtgttcaaattaaaggcgaagtggtt
taccgcgtcaccgatctgattgaggtaaccatcgctgaagtgcgcatggaaacccgcagt
attgtcgcccgcccactggcctga
DBGET
integrated database retrieval system
