Erwinia amylovora ATCC 49946: EAM_1955
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Entry
EAM_1955 CDS
T01199
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
eay
Erwinia amylovora ATCC 49946
Brite
KEGG Orthology (KO) [BR:
eay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eay03016
]
EAM_1955 (rnd)
Enzymes [BR:
eay01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
EAM_1955 (rnd)
Transfer RNA biogenesis [BR:
eay03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
EAM_1955 (rnd)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
CBJ46630
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All DBs
Position
complement(2099566..2100687)
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AA seq
373 aa
AA seq
DB search
MNYTMITTNAALCEVCQRARQVPALALDTEFVRTRTYYPRLGLIQLYDGETICLIDPLPI
TDWTPFRDLLLDQQVIKYLHAGSEDLEVFQHEFGVLPQPMIDTQILAAFSGRPLSCGFAT
IVESFTGIVLDKSESRTDWLARPLSEKQCRYAAADVFYLLPIAEKLVAETEAAGQMAAAL
DECRLLCQRRTSVLKPQEAYREIANAWQLRPRQLAALRQMAAWRLEVAREKDMAVNFVVR
EENLWKAARFMPGSLAELDHLGLSGQEIRFHGKALLAMVAEANALEEEQLPPPVANLMDY
PHYKQVFKSLKGLVAETAERHGVSQELLASRRQINQLLSCHWQLKPQQGKPELIDGWRGV
LLDAGIAEILAAH
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
ttgaattacaccatgatcaccactaacgcagcgctgtgcgaagtgtgccagcgcgcccgc
caggttccggcgctggcgctggacacagaatttgttcgtacccgcacttactaccctcgt
ctgggattaatacagctgtacgatggtgaaactatctgcctgattgatccactgcccatt
accgactggactccattcagagatctgctgttggaccagcaggtcataaaatacctccat
gcagggagcgaggatctggaggtttttcagcatgaatttggcgtgctgccgcagccaatg
atcgatacgcagatcctggcggcgttcagtggccgtccgttatcatgcggttttgccact
atcgttgaatcctttaccggcatcgtactggataaaagtgaatcgcgcaccgactggctg
gcgcggccattgagtgaaaagcagtgccggtatgcggctgccgatgtgttctatttactg
cccattgccgaaaagctggtagccgaaaccgaagctgcaggccagatggctgctgcgctt
gacgagtgccgtttactttgccagcgccgcaccagcgtactgaaaccccaagaagcctac
cgggaaattgccaatgcctggcagttacgcccacgccagctggcggcattgcggcagatg
gccgcatggcgactggaagtagcgcgtgaaaaagacatggcggttaactttgtcgttcgt
gaagagaatctgtggaaggctgcccgctttatgcccggatccctggcagagctggatcat
ttagggttatcaggtcaggagatccgtttccacggtaaggcgctgttggcaatggttgcc
gaggcaaatgcgttggaggaggagcagttaccgccaccggtagccaacctcatggattac
ccgcattataagcaggtatttaagagtctgaaagggctggtggccgaaacggcagagcgg
catggcgtcagtcaggagctgttggcatcacggcgtcagataaatcagctgttaagctgc
cactggcaactcaaacctcagcaggggaaacctgaactgattgacggctggcgtggcgtt
ctgttagatgcaggtatcgccgagatcctcgctgcacactga
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