Erwinia amylovora ATCC 49946: EAM_2683
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Entry
EAM_2683 CDS
T01199
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
eay
Erwinia amylovora ATCC 49946
Brite
KEGG Orthology (KO) [BR:
eay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eay03016
]
EAM_2683 (truD)
Enzymes [BR:
eay01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
EAM_2683 (truD)
Transfer RNA biogenesis [BR:
eay03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EAM_2683 (truD)
Prokaryotic type
EAM_2683 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
CBJ47357
LinkDB
All DBs
Position
complement(2922150..2923199)
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AA seq
349 aa
AA seq
DB search
MDLSGQGWLHGKPTASGVLKSSPEDFVVIEDLGYAPDGDGEQLLVRVRKQGCNTRFVAEA
LAKFAAIHPREVSFAGMKDRHAVSEQWFCLRLPGKVTPDMNTFQLEGVQVLESTRHRRKL
RTGALQGNAFTLVLRQISDREAVEQRLQQIAANGVPNYFGSQRFGHDGNNLTLAQRWAAD
EIRVRERSKRSIILSAARSAMFNQVVSDRLAQQGSLSRVLAGDALQLTGRGSWFVAEAAE
LGSLQQRVDSNELRITAPLPGSGEWGSRDGALAFEQNSLAHQGALIALMGRERVDTARRA
MLVIPRDLIWSWADDATLEMNFWLPAGSFATSLVRELLVTQSSSTEADE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggatttatccggtcagggctggctgcacggcaaacccactgccagcggcgtgctgaaa
agtagccccgaagatttcgtggtgattgaagatctcggctacgcgccggatggggatggc
gaacagctgctggtgcgcgtgcgtaaacaaggctgcaatacgcgttttgttgccgaggcg
ctggcgaaatttgctgctattcatccgcgggaggttagctttgccggcatgaaagacaga
catgccgtcagcgagcagtggttctgtctgcgtctgccgggcaaagtcacgccggacatg
aacacctttcagctggagggcgtacaggtgctggaaagcacgcgacatcgccgcaaactg
cgcaccggggccttgcagggcaatgcctttacgctggttctgcgtcagatatccgaccgc
gaggcggtggaacaacgcctgcagcagattgccgctaacggggtgccaaactattttggc
agccagcgcttcggtcatgatggcaataatctgacgctggcacagcgctgggcggcggat
gaaattcgcgtacgcgagcgcagtaaacgcagtattattctgtctgccgcacgtagcgcg
atgttcaatcaggtcgtgagtgaccgtctggcgcagcagggatccctgagtcgggtactg
gccggcgatgcgctacagcttaccgggcgcggcagctggtttgtggcagaagccgctgaa
ctcggcagtctgcaacagcgcgtggacagcaatgagctgcgtatcaccgcgccgctgccg
ggcagcggtgaatggggctcgcgtgacggagcgctggcctttgagcaaaacagcctggcg
catcagggcgcgcttatcgcgttgatggggcgtgagcgggtcgacacagcgcgccgtgcg
atgctggtgatacctcgcgatctgatctggagctgggcagatgacgccacgcttgagatg
aacttctggctgcccgccggcagctttgccaccagcctggtaagagaactgttggtcact
cagagcagttccaccgaagcagacgagtaa
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