| Entry |
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| Symbol |
recB
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| Name |
(GenBank) exodeoxyribonuclease V beta chain
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| KO |
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| Organism |
eay Erwinia amylovora ATCC 49946
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:eay00001]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EAM_2729 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:eay03400]
EAM_2729 (recB)
Enzymes [BR:eay01000]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EAM_2729 (recB)
DNA repair and recombination proteins [BR:eay03400]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EAM_2729 (recB)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(2973206..2976742)
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| AA seq |
1178 aa
MSQRAAETLEPLSLPLHGERLIEASAGTGKTFTIGLLYLRLLLGLGGEAAFSRPLSVEEI
LVVTFTEAATAELRGRIRANIHELRIACIRGESPNLMLAALMAEIADLPQAASVLLAAER
QMDEAGIFTIHGFCQRMLNLNAFESGMLFEQELLEDETPLRRRAAADFWRRYCYPLPLPV
ARVVRQLWAGPEQLLKTLSPWLGGEAPMLKSAPDNDETIEQRHEKIIARISTLKQAWLAA
GDLQQVIDASGVDRRSYNSKHLPNWLEKISLWAQAETQDYEVPKDLERFGQRLLLEKTKK
GEPPRHPLFDRIDAFLAEPLSLRDLVIARALQQVRFVTQQQKRLHAQLGFDDLLGRFDAA
LQQPGGEALASAIRQRYPVALIDEFQDTDPQQYRIFRTLYRRQPDSALLLIGDPKQAIYA
FRGADIFTYMKARSEVSAHYTLETNWRSSPAMVNAVNQLFSGQQNPFLFSEIPFINVNPA
APNHGLNFSVQGKVQPALQFWLQPGDGVGVSDYQQFMARQCAAEICRWLSAGQKGEALMG
KSGQQRAVQASDITVLVRSRSEAAVIREALNALAIPSVYLSNRDSVFTTPEAREMLWLLQ
AVLAPEQERILRSALATSLFGTDALALDALSQDERAWDALVDEFVDYRQRWLQRGVLPML
RELMMKRQIAENLLASGNGERRLTDLLHLGELLQEASATLDSEHALVRWLAQQIEQPDGQ
SASQQLRLESDRHLVQIVTIHKSKGLQYPLVWLPFVANFREADNGVYHDRQTFTALLDLQ
QSEESIELAEQERLAEDLRLLYVALTRSIFHCSVGIGPLIKGTRKKEGNSDLHRSALGYL
VQQGEPADATGLLAALQALNSDATALIIAAEADAPPWQTQQEEVGILSSRTLPRSLRDNW
RVTSYSGLQQHGHSIVMEWLPRLDVDAAGEASIERVPQLTPHTFPRGAGPGTFLHGLFET
LEFSAPLDEEWLAQQLSAQALGEEWQPVMRNWIERILQTPLNETGVSLYQLPAPARKAEL
QFYLPISRLLTSEALDRVVRQDPLSQPCPPLDFHQVRGMLKGFIDLVFCWQGKYYLLDYK
SNWLGEDSSAYTQEAMAQAMQAHRYDLQYQLYTLALHRYLRHRLVDYDYQLHFGGVIYLF
LRGLDGVAGSNGIYCTRPQPEFVTALDQLFANPPESNV |
|---|
| NT seq |
3537 nt +upstreamnt +downstreamnt
atgagtcaacgagccgcagaaacgctggagccactgagtcttcccctgcacggcgagcgg
ctgattgaagcgtcggccgggacgggaaaaaccttcaccatcgggctgctctatctgcgg
ctgctgctcggtttgggaggggaggcggccttcagccgcccgctatcggtagaggaaatt
ctggtcgttaccttcaccgaggccgccaccgccgagctgcgcggtcgtattcgtgccaat
atccacgagctgcgcatcgcctgcattcgtggtgaaagcccgaatctgatgctggcggca
ttaatggcggagatcgccgatctgccccaggcggcatcggtgctgctggcggccgagcgc
caaatggacgaagccggtatttttaccattcacggcttttgccagcgcatgctgaatctc
aatgcttttgagtccggtatgctgtttgagcaggagttgctggaagacgaaaccccgctg
cgccgccgcgctgccgctgatttctggcgtcgttattgctacccgctgccgctgccggtg
gcacgcgtggtgcgccagctgtgggccgggccggagcagttgctgaaaaccctgtcgccg
tggctgggtggggaagcaccgatgctgaaatcggcaccggataacgatgaaactattgag
cagcgtcatgagaaaatcattgcgcgtatcagcacgctgaagcaggcgtggctggcagca
ggtgatttacagcaggtcattgacgcttcgggcgttgaccgtcgcagttacaatagtaag
cacttaccaaactggctggagaaaatctccctgtgggcgcaggcggaaacgcaagactac
gaggtgccaaaagaccttgagcgtttcggccagcgcctcctgttggagaaaactaaaaaa
ggtgagccgccacgtcatcctctcttcgatcggattgacgcctttctcgccgagccgctg
tcgctacgtgacctggtgattgcccgcgcgctgcagcaggttcgctttgttacccaacag
cagaaacgcctgcacgcccagttaggatttgacgatctgctggggcgcttcgatgctgcg
ttgcagcagccgggcggtgaggcgctggcttcagctattcgccagcgctatccggtggcg
ctgatcgacgaatttcaggacaccgacccgcagcagtatcgtatttttcgcaccctgtat
cgtcggcagcctgacagcgcactgctactgatcggcgacccaaaacaggcgatctacgcg
tttcgcggcgcggatatctttacctatatgaaggcgcgatctgaagttagcgcccactat
acgttggagactaactggcgctcgtcaccggcaatggttaacgcggtcaaccaactgttt
tcaggccagcaaaatccgttcctcttcagcgaaataccctttattaacgtcaatccggct
gcgcctaatcacggcctgaactttagcgtgcagggtaaagtgcagcctgccctgcagttc
tggctacagcccggtgatggagtgggtgtaagtgattaccaacagtttatggcgcgtcag
tgcgcggcagaaatatgccgctggctcagtgcagggcagaagggcgaggcgctgatgggt
aaaagcgggcagcagcgtgcggttcaggcctcggacattaccgtgctggtgcgcagccgc
agtgaagccgcggtgatacgtgaagcgttaaatgccctggccattccgtcagtttacctc
tccaaccgtgacagcgtatttaccacgccggaagcgcgtgaaatgctgtggttgttacag
gcggtgttagccccggagcaggagcgcattctgcgcagcgcgctggccaccagcctgttt
ggcaccgatgcgctggcgctggatgcgctcagccaggacgaacgcgcatgggacgcgctg
gtggatgagttcgttgattatcgccagcgctggctgcaacgtggcgtgctgccgatgctg
cgtgagctgatgatgaaacgtcagatagccgaaaacctgctggcctccggtaacggcgaa
cgccggctgaccgatctgctgcacctgggcgaactgttgcaggaagcctccgccaccctc
gatagcgaacatgcgctggtgcgctggctggcccagcagattgagcagccggatggccag
tccgccagtcagcagctgcgtctggagagcgatcggcatctggtacagattgtgactatc
cacaaatccaaaggcttgcagtatccgctggtgtggctgccgtttgtcgccaactttcgc
gaggcggataacggcgtctaccatgaccgacagacctttaccgcgctgcttgatttacag
cagagcgaggagagtatcgaactggcggagcaggagcggctggcagaagatctgcgattg
ctctacgttgcactgactcgttcgatatttcactgtagcgttggcatcgggccgctgatt
aagggcacgcgtaaaaaagagggcaacagcgatctgcatcgcagcgcgctgggctatctg
gtgcagcagggggaacccgccgatgccactggcctgctggcagcgttgcaggcgcttaac
agtgatgccacggcgttaatcatcgcagcagaggcagatgcccccccctggcagacgcag
caagaagaggttggtattctgagtagccggacgctgccgcgttcgctgcgtgataactgg
cgcgtaaccagttattccgggctgcaacagcacggccattccatcgtgatggaatggctg
ccgcgcctcgatgttgacgcagccggtgaagccagcattgagcgcgttccgcagctgacg
ccgcatacttttccgcgcggtgccgggccggggacatttctgcacgggctgtttgaaacg
ctggagttcagcgccccactggatgaagagtggctggcgcagcaactcagcgctcaggcg
ctgggcgaggagtggcagccggtgatgcgcaactggattgagcgcatcctgcaaaccccg
cttaatgagacgggcgtcagcctttatcagctgccagcaccagcgaggaaggcggagctg
cagttctatttgccgatctcccgtctgctgacgtcagaggcgctggaccgggtggtacgt
caggacccgctgtcgcagccgtgcccgccgctcgactttcaccaggttcggggcatgctg
aaaggttttatcgatctggtgttctgctggcagggtaaatattacctgctggactataag
tctaactggctgggcgaagacagcagcgcctatacccaggaggcgatggctcaggcgatg
caggcgcatcgttatgatttgcagtaccagctctatacgctggcgctgcaccgctatctg
cgtcaccgcctggttgattacgactatcaacttcattttggtggcgttatctacctgttt
ctgcgtggtctggacggcgtggctggcagcaacggtatttactgtacccgaccgcagccg
gagtttgttaccgctctcgaccaactgtttgctaaccccccggagagtaacgtatga |
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