Erwinia amylovora ATCC 49946: EAM_2731
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Entry
EAM_2731 CDS
T01199
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V gamma chain
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
eay
Erwinia amylovora ATCC 49946
Pathway
eay03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EAM_2731 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eay03400
]
EAM_2731 (recC)
Enzymes [BR:
eay01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EAM_2731 (recC)
DNA repair and recombination proteins [BR:
eay03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EAM_2731 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
CBJ47405
LinkDB
All DBs
Position
complement(2979804..2983172)
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AA seq
1122 aa
AA seq
DB search
MFTVYHSNQLDVLKTLACWQIENQPLRDPLCSEVVLVQSPGMAQWLQMSLAEQFGIAANI
DFPLPASFIWDMFVRVLPDIPKESAFNKSSMSWKLMAILPDMLPGEAFTMLRHYLSDDND
KRKLFQLASRVADLFDQYLVYRPQWLNGWEKGRLTEGLGEAQIWQAPLWAALVEYTRRLG
QPEWHRANLYQRFISRLENSSSRPANLPDRVFICGISALPPVYLQALQALGKHIDIHLLF
TNPCRYYWGDIQDYGFLARLQSRHRRHYLDGRPVPQFRDAENASSLFNDAGEQQTSNPLL
ASWGKLGRDNLYLLAQMEPNEVFAFVDIEPTNLLQTLKRDLLELEDHAVIGLQKSEWENS
RSKRILAADDRSLVIHLCHSPQREVEVLQDRLLAMMADDTTLTARDIIVMVADIDAYTPF
IQAVFGNAPADRAVPFAISDRRASQAHPALQAFISLLSLPDSRFTAEEVLALLEVPAVAS
RFAIDEEGLRLLRHWVAESGVRWGLDDDGVRNLDLPATGQHTWHFGLTRMLLGYAMNSEA
GDWQGILPFDESSGLIAELAGNLAELLMQLNRWQQWLSEPRELDSWLPLCRRMLDDFFIS
DAETEAALALIEEQWQQVINYGVQAGYQQAVPLTLLRDELSSRLDQQRISQRFLAGPVNF
CTLMPMRSIPFKVVCLLGMNDGVYPRTLPPLGFDLMSQQLQKGDRSRRDDDRYLFLEALN
SAQQQLYISYIARSIQDNTERYPSVLVSELVEYISQSFCLAEDSARDADASAEAVVKHLH
HLHSRMPFAVENFHPQAEFRSFAAEWLPAASGQGTAHPPFMQSLPEESETVIDFDRLVRF
WRHPVRAFFSLRLGVSFQLEETGLPDAEPFSLDGLSRYQVNSLLLNSLIDGKEGGKLYAR
QRAAGALPYGAFGELFWQEQEAEMSELAARVREQRAAAESWEVSLTPGGFTLSGWLTQVQ
DNGLLRWRPGILNFHDGLTLWLEHLVYCAMGGSGSSLMLGRKESVWRFPPLAADAAQQQL
VDYIDGYRQGMRAPLLLTASGGAWLKACFDQKAGVLQHDDATQRQARGKLLQCWQGNYQV
EGEGSDPYLQRLLRRLDDDSVQEMSAQAVRWLLPLLLHHQPD
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgtttaccgtttatcactcgaatcagctggacgtgctgaaaacgctggcctgctggcag
attgaaaaccagccgctgcgcgatccgctgtgttctgaggtggtactggtgcaaagcccc
ggcatggcgcagtggctgcaaatgtcgctggccgaacagtttggtatagctgccaatatc
gacttcccgctgcccgccagctttatctgggacatgtttgtgcgcgtactgcctgatatt
cctaaggagagcgcgtttaacaaatccagtatgagctggaagctgatggcgatccttccc
gatatgctgccgggagaagcctttaccatgctgcgtcactatctgagcgacgataatgat
aaacgcaagctcttccagctggcatcgcgcgtggcagatctgtttgaccagtacctggtc
tatcgtccgcagtggctgaacggttgggaaaagggccggctgacagaagggctgggggag
gctcagatatggcaggccccgctgtgggccgcgctggtggaatacacccggcggctgggg
caaccggaatggcaccgtgccaatctttatcaacgctttatttcccggctggaaaacagc
agctcgcgcccggcaaatctgccggatcgggtgtttatctgcggtatttcggcgctgccg
ccggtctatctgcaggcgctgcaggcgttgggaaaacatattgatattcatctgttattt
accaacccttgtcgttactactggggcgacattcaggactacggtttcctcgccaggctg
caaagccgtcaccgtcgacattacctggatggccggcctgtcccgcagtttcgtgatgcc
gaaaacgcttcctcgctgtttaatgacgctggcgagcagcagaccagcaacccgctgctg
gcttcctgggggaagctggggcgcgataatctctatctgctggcgcagatggaaccaaac
gaagtgttcgcctttgttgatattgaacctaccaacctgctgcaaacgctcaagcgcgac
ctgctggagctggaagatcatgcggtgatcggcctgcaaaaaagcgagtgggagaacagc
cgcagcaaacgcatcctggctgcggatgaccgttcgctagtgattcacctgtgccacagc
ccgcagcgtgaagttgaagtgttgcaggacaggctgctggcgatgatggcagacgacacg
acgctgaccgcacgggatatcatcgtcatggtcgccgatatcgatgcctatacgccgttt
attcaggcggtgtttggcaatgcaccagccgatcgtgccgtgccgtttgccatttctgac
cgccgtgccagccaggcgcatccggcgcttcaggcctttatttcgctgctcagtctgccg
gacagccgctttaccgcagaggaagtgcttgccctgctggaagtacccgccgttgccagc
cgtttcgccatagacgaggagggactgcgcctgctgcgccactgggtagcggagtcgggg
gtgcgctgggggctggacgatgacggcgtgcgcaatctcgatctgcccgccaccggccag
cacacctggcattttggcctgacgcgcatgctgctgggctatgccatgaacagcgaagcg
ggcgactggcaggggatcctgccctttgacgagtccagcgggttgattgccgaactggcg
ggaaacctggccgaactgctgatgcagctcaaccgctggcagcagtggttaagtgaaccg
cgcgagttagatagctggttaccgctgtgtcgccggatgctggatgacttttttatcagc
gatgcagaaacagaagccgcgctggcgctgattgaagaacagtggcagcaggtgattaac
tacggcgtgcaggccggatatcaacaggccgtgccgctcaccttgctgcgcgatgagctg
tcatcgcgccttgaccagcaacggatcagccagcgattccttgccggcccggtcaatttc
tgtaccctgatgccgatgcgctcaattcccttcaaagtggtgtgcctgctgggtatgaac
gacggagtctatccgcgtaccttgccgccgctgggctttgacttaatgagtcagcaattg
caaaagggcgatcgcagccgtcgcgacgatgaccgctatctgttccttgaagcactcaac
tcggcgcagcagcagctgtatatcagctatattgctcgctcgatacaggataatacggaa
cgttatccgtcggtgctggtcagtgaattggtggaatacatcagccagagcttctgcctg
gccgaagacagcgccagagatgcagacgccagcgctgaagcggtagtgaaacacctgcat
catctgcacagtcgtatgccgtttgcggtggagaatttccacccacaggcagaatttcgc
agctttgctgccgaatggctgcccgctgccagcggacagggaactgcccatccgccgttt
atgcagtcgctgccggaagagagcgaaacggtcatcgattttgacaggctggttcgtttc
tggcgtcacccggttcgggcttttttcagcttacggctcggcgtcagcttccagctggaa
gagaccggattgccggatgcggaaccgttttctcttgatggcctgagccgttatcaggtc
aacagcctgttgcttaacagcctgattgacggaaaagaaggtggcaagctgtatgcccgg
cagcgcgctgccggagcattgccttacggcgcatttggtgaactgttctggcaggaacag
gaagcggaaatgagcgagctggccgcgcgggtgcgagagcagcgtgcggcggcggaaagc
tgggaggtttcgctaacgcctggcgggtttacgcttagcggctggctgacgcaggtacag
gacaacgggctgctgcgctggcgtccggggatcctgaacttccatgatggcttaacgcta
tggctggaacatctggtttactgcgccatgggtggcagcggcagcagcctgatgctgggg
cgtaaagagagcgtatggcgcttcccgccgctggctgccgatgccgcgcagcagcagctg
gttgactatattgatggttaccgccaggggatgcgtgcgcctctgttgctcaccgcttcc
ggcggtgcctggctgaaggcgtgctttgatcaaaaggctggcgtattgcagcatgatgat
gccacgcagagacaggcacgcggaaagctattgcagtgctggcagggaaattatcaggtt
gagggcgaggggagcgatccctacctgcaacggttgctgcgtcggctggatgatgacagc
gtacaggagatgagcgctcaggcagttcgctggctgttaccgctgctgctgcaccatcag
cctgactaa
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