Erwinia amylovora ATCC 49946: EAM_3067
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Entry
EAM_3067 CDS
T01199
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
eay
Erwinia amylovora ATCC 49946
Pathway
eay03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eay00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EAM_3067 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eay03019
]
EAM_3067 (pnp)
03016 Transfer RNA biogenesis [BR:
eay03016
]
EAM_3067 (pnp)
Enzymes [BR:
eay01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
EAM_3067 (pnp)
Messenger RNA biogenesis [BR:
eay03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EAM_3067 (pnp)
Transfer RNA biogenesis [BR:
eay03016
]
Prokaryotic type
tRNA degradation factors
EAM_3067 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
OB_RRP5_4th
aRib
KH_2
OB_PDCD11
S1_RRP5
KH-I_KHDC4-BBP
KH_SLS1_2
S1_TP0910
Motif
Other DBs
NCBI-ProteinID:
CBJ47741
LinkDB
All DBs
Position
complement(3360367..3362499)
Genome browser
AA seq
710 aa
AA seq
DB search
MLNPIVKKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKSKPGQDFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLTSRLIDRPIRPLFPEGFVNEVQVIATVVSV
NPQVNPDIVAMIGASAALALSGLPFNGPIGAARVGYLNDQYVLNPTSDELKESKLDLVVA
GTQGAVLMVESEAELLSEEQMLGAVVFGHDQQQIVIDNINALVAEAGKPRWDWQPEAVNE
ALRSRIAAQAESRLSDAYRITEKQERYAQVDVIKSETTAALLAEDDTLDAGEISDLLHAL
EKDVVRSRILRGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQNLDELMGERTDNFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPKGEA
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKDDNNFVVLSD
ILGDEDHLGDMDFKVAGSREGITALQMDIKIEGITREIMQVALNQAKGARLHILSVMEQA
ISGPRGDISQFAPRIHTIKISVDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGDKAKFAIRRIEEITAEIEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEAGEQAQPEAEAAPAAPEAQ
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaacccgatcgtaaaaaaattccagtatggccagcacaccgtcactcttgaaacc
ggaatgatggctcgccaggcaacggcagccgttatggtcagcatggatgacactgctgtt
ttcgtcaccgtggtaggtcagaaaaaatccaaaccaggtcaggacttcttccctctgacc
gtgaactatcaggagcgtacctacgctgctggccgtattccgggcagcttcttccgccgt
gaaggccgcccaagcgaaggcgaaacgctgacttcgcgcctgattgaccgcccaatccgt
ccactgttccctgaagggtttgtcaatgaagtgcaggtgattgccaccgtggtctccgtt
aaccctcaggttaacccggacatcgtcgcgatgatcggtgcttctgctgcgctggcgctt
tctggcctgccgtttaacggtcctatcggtgcggcacgcgtcggttacctgaacgatcag
tacgtgcttaacccaaccagcgatgagctgaaagagagcaagctggacctggtggttgcc
ggtacccaaggcgcagtactgatggttgaatctgaagccgagctgctcagcgaagagcag
atgctgggtgcagtggtattcggccacgaccagcaacagatcgtcatcgacaacatcaat
gcgctggtcgctgaagcgggcaaaccgcgttgggactggcagccagaagcggttaacgaa
gcattgcgctcacgtatcgctgcgcaggccgagtcgcgcctgagcgatgcttaccgcatt
accgaaaaacaggagcgttacgctcaggttgacgtcatcaaatctgaaaccactgctgcg
ctgctggcggaagacgacacgctggacgccggtgagatcagcgatctgctgcacgcgctg
gaaaaagacgtggtacgcagccgcattctgcgtggcgaaccgcgtatcgacggccgtgaa
aaagacatgatccgtggccttgacgtacgcaccggcgtgctgccgcgtacgcatggctcc
gcgctgttcacccgtggtgaaactcaggcgctggttaccgccacgctgggtactgcccgt
gatgcgcagaacctcgacgagctgatgggcgagcgtactgacaacttcctgttccactac
aacttccctccttactccgtcggtgaaacgggtatggtcggttcgcccaagcgtcgtgaa
attggtcacggtcgtctggcgaagcgtggtgtgctggcggtgatgccaaaaggcgaggca
ttcccgtataccgttcgcgtggtgtctgaaatcactgaatcaaacggctcctcttctatg
gcgtctgtttgtggtgcttctctggcgctgatggatgctggcgtgccaatcaaggccgct
gtagccggtattgcgatgggcctggtgaaagacgacaacaactttgtggtgctgtccgac
atcttgggtgacgaagatcatctgggcgacatggacttcaaagtcgccggtagccgtgaa
ggcatcaccgcgctgcagatggacatcaaaattgaagggattacccgcgaaatcatgcag
gtggctctgaaccaggcgaagggtgcgcgtttgcacattctgagcgtcatggagcaggct
atcagcggtccgcgtggcgacatttctcagtttgctccacgtattcacaccatcaagatc
agcgttgataaaatcaaagacgtgatcggcaaaggtggctccgttatccgtgcgttgacg
gaagaaactggcaccaccatcgaaatcgaagacgatggcacggtgaaaatcgccgctacc
gacggtgacaaagcgaaatttgcgattcgtcgtatcgaagagatcaccgcagagatcgaa
gtggggcgtatttacaacggtaaagtgacgcgcatcgttgatttcggtgcctttgtggcc
atcggcggcggtaaagaaggtttggtacatatttctcagatcgccgacaagcgtgtagaa
aaagtgacagactatttgcagatgggccaggaggttccggtaaaagtactggaagttgac
cgtcagggccgcgtacgcctgagcatcaaagaagctggcgaacaggctcaacctgaagca
gaagccgctcctgcagcaccagaagctcaataa
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