Erwinia amylovora ATCC 49946: EAM_3131
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Entry
EAM_3131 CDS
T01199
Symbol
cafA
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
eay
Erwinia amylovora ATCC 49946
Brite
KEGG Orthology (KO) [BR:
eay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eay03019
]
EAM_3131 (cafA)
03009 Ribosome biogenesis [BR:
eay03009
]
EAM_3131 (cafA)
Messenger RNA biogenesis [BR:
eay03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EAM_3131 (cafA)
Ribosome biogenesis [BR:
eay03009
]
Prokaryotic type
rRNA processing factors
EAM_3131 (cafA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
CBJ47805
LinkDB
All DBs
Position
complement(3430362..3431831)
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AA seq
489 aa
AA seq
DB search
MTAELLVNITPSETRVAYIDGGILQEIHIEREARRGIVGNIYKGRVSRVLPGMQAAFVDI
GLEKAAFLHASDIMPHTECVAGDEKKNFIVRDISELVRQGQDLMVQVVKDPLGTKGARLT
TDITLPSRYLVFMPGASHVGVSQRIDSEAERNRLKEVVAAYCDELGGYIIRTAAEGVGED
ELASDAAFLKRLWTKVIERKKRNQTRCRLYGEVALSQRILRDFAGAALDRIRIDSRLSFE
QLIEFTREYIPEMTAKLELYTGKQPIFDLFDVENEIQRSLDRKVELKSGGYLIIDQTEAM
TTVDINTGAFVGHRNLEETIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMNNEDHRRRV
LHSLDQALSKDRVKTGVNGFSQLGLVEMTRKRTRESIEHVLCQDCPVCKGRGTLKTVETV
CYEIMREIVRVHHAYDSDRFLVYVSPSVGEALKSDESHALAEVEIFVGKQVKVQVEPLYT
QEQFDVVMM
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgagctactggtcaatattacgccgtcggaaacgcgagttgcctacatcgac
ggtggcattctgcaggaaattcatattgagcgcgaagcgcgtcgcggcatcgtcggtaat
atttataaagggcgtgtcagccgcgttttaccgggaatgcaggcggcgtttgtggatatc
ggtcttgaaaaggccgcgttcctgcacgcctctgatattatgccgcataccgagtgcgtg
gccggtgacgaaaagaaaaactttatcgtacgcgatatctccgagctggtgcgtcagggg
caggacctgatggtgcaggtagtaaaagatccgcttggcaccaaaggcgcacgtctcact
accgacatcaccttgccatcgcgctacctggtgtttatgccgggggcttcacacgttggc
gtatcgcagcgtattgacagcgaagctgaacgcaaccgtttgaaagaagtggtagcggct
tactgcgacgaactgggcggctatatcattcgtactgccgccgaaggggtcggtgaagat
gaactggcttctgatgccgcatttcttaagcgtttgtggaccaaagtcatcgagcgtaaa
aaacgtaatcagacgcgctgccgcctttatggcgaggtggcgctgtcgcaacgcatcttg
cgtgactttgccggtgcggcgctggatcgcatccgtatcgattcgcggctaagctttgaa
cagctgatcgagttcacccgcgaatacatcccggaaatgacggcgaagctggagctgtat
accggcaagcagccgatatttgacctgttcgatgtcgaaaatgaaattcagcgttcgctt
gaccgtaaagtggagctgaagtccggcggatatctgatcatcgatcagacggaagccatg
accactgtcgacatcaataccggggcgtttgtcggtcatcgcaatctggaagaaaccatc
ttcaataccaatatagaagcgacgcaggccattgcccgccagctgcgtttacgcaatctg
ggcggcattatcattatcgattttatcgatatgaataatgaagaccaccggcgccgggtg
ctgcattccctggaccaggcgttgagcaaagatcgggtcaaaaccggtgttaacggattc
tcccagctggggctggttgagatgacgcgtaagcgaacgcgcgaaagtattgaacacgta
ctgtgccaggattgcccggtgtgcaaagggcgcggcacgttgaaaaccgttgagaccgtc
tgctacgagattatgcgtgagatcgtgcgtgtgcatcatgcctatgactcagatcgtttc
ctggtctacgtttccccatccgtgggagaagcgttaaaaagcgacgaatcgcatgccctg
gccgaagtggaaatctttgtcggcaaacaggttaaagtccaggttgaaccgctctatact
caggagcaatttgacgtggtgatgatgtag
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