Erwinia amylovora ATCC 49946: EAM_3450
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Entry
EAM_3450 CDS
T01199
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
eay
Erwinia amylovora ATCC 49946
Brite
KEGG Orthology (KO) [BR:
eay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eay03032
]
EAM_3450 (gyrB)
03400 DNA repair and recombination proteins [BR:
eay03400
]
EAM_3450 (gyrB)
Enzymes [BR:
eay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
EAM_3450 (gyrB)
DNA replication proteins [BR:
eay03032
]
Prokaryotic type
DNA Topoisomerases
EAM_3450 (gyrB)
DNA repair and recombination proteins [BR:
eay03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EAM_3450 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
GyrB_hook
HATPase_c
HATPase_c_3
DUF6865
Motif
Other DBs
NCBI-ProteinID:
CBJ48124
LinkDB
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Position
complement(3768161..3770569)
Genome browser
AA seq
802 aa
AA seq
DB search
MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCSDIL
VTIHADNSVSVQDDGRGIPTGIHEEEGISAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSEKLELTIRREGKVHQQVYVHGVPQAALNVTGETDLTGTRVRFWPSHQTFTNVV
EFEYEILAKRLRELSFLNSGVSIKLEDKRDGKNDHYHYEGGIKAFVEYLNKNKTPIHPNV
FYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKE
GYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLSEY
LLEHPGDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPALSEI
YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLASQEVATLITALGCGIGR
DEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIIERGHVYIAQPPLYKVKKG
KQEQYIKDDEAMDQYQIAIALDGATLHANASAPALGGKPLEDLVSEFNSTRKMIKRMERR
YPMALLNALIYHATLSDLTAQAPVNTWLDGLVTYLNENDQHGSSYNGVVRENRELHLFEP
VLRVRTHGVDTDYPLDNEFILGGEYRKICALGEQLRGLIEEDAYIERGERRQPIASFEQA
IDWLGKESRRGLSVQRYKGLGEMNPEQLWETTMDPDSRRMLRVTIKDAVAADQLFTTLMG
DAVEPRRAFIEENALRAANIDI
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaattcttatgactcctccagtatcaaagttctcaaggggctggatgcggtacgc
aagcgcccgggtatgtatatcggcgatacggatgacggcaccggtctgcatcacatggta
tttgaggtcgtggataacgccattgacgaagccctcgccggtcactgctccgatattctt
gtgaccattcatgccgacaactctgtctcggtacaggatgacggtcgtggtattcctacc
ggtatccacgaagaagaggggatctctgccgctgaagtgatcatgaccgtgctgcatgcg
ggcgggaagtttgatgataactcctataaagtttccggcggcctgcacggcgtgggtgtt
tccgtggttaacgccctgtcggaaaaactggaactgaccatccgccgtgaaggcaaagtc
caccagcaggtctacgttcacggcgtgccacaggccgcgctgaatgtcaccggcgaaacc
gatttgaccggaacgcgggtgcgtttctggcctagtcatcaaacctttactaacgttgtt
gaattcgaatacgaaatactggcaaaacgtctgcgtgagctgtcgttcctgaactccggc
gtatccatcaagctggaagataagcgtgacggcaaaaacgaccattaccactacgaaggt
ggtatcaaagcgttcgttgagtacctgaacaaaaacaaaaccccgatccaccccaacgtg
ttctatttctccaccgagaaagatggcatcggcgtggaagtggccctgcagtggaacgat
ggtttccaggaaaatatctactgctttaccaacaatattccgcagcgcgacggcggtacg
cacctggcgggcttccgtgccgccatgacccgcaccctgaacgcctacatggataaagaa
ggctacagcaagaaagccaaagtcagcgccaccggtgacgacgcgcgtgaagggctgatc
gcggtggtatcggtcaaagtgccggatccgaaattctcctcacagactaaagacaaactg
gtttcctctgaggtgaaatcggcggttgagcagcagatgaacgaactgctgtctgaatac
ctgctggaacatccgggcgatgcgaaaatcgtggtcggtaaaattattgatgcggctcgt
gcgcgtgaagcggcgcgccgcgcgcgtgagatgacccgccgtaaaggcgcgctggacctg
gcggggctgccgggcaagctggctgactgccaggaacgcgatccggcgctgtctgaaatc
tacctggtggagggtgactccgcgggaggatctgccaaacaggggcgtaaccgcaaaaat
caggccatcctgccgttgaaaggtaaaatcctcaacgtggagaaagcgcgctttgataag
atgctggcttcacaggaagtggcaacgctgatcaccgcgctgggctgcggcattggccgc
gacgaatacaacccggacaaactgcgctatcacagcattatcatcatgaccgatgctgac
gttgatggttcacatatccgtacgctgctgttgaccttcttctatcgtcagatgccggaa
atcatcgagcgtggccacgtctatatcgcgcagccgccgctgtacaaagtgaaaaaaggc
aagcaggaacagtatattaaagacgatgaggcgatggatcagtaccaaatcgctattgct
cttgacggtgccacgctgcacgccaacgccagcgctccggcgctgggcggcaagccgctg
gaagacctggtgtctgagttcaacagcacgcgcaaaatgatcaaacgcatggagcgccgc
tatccgatggcgctgctgaacgcgctgatctaccacgccaccctgagtgatttgacggcg
caagcgccggtaaatacctggctggatggcctggtaacctatcttaacgaaaacgatcag
cacggcagcagctataacggcgtggtgcgtgaaaaccgcgaactgcacctcttcgagccg
gtactgcgcgtacgcacccacggtgtggataccgattacccgctggataacgaatttatc
ctcggcggcgaataccgcaaaatatgcgcgcttggcgagcagttgcgtggcctgatcgaa
gaagatgcgtatatcgaacgtggcgaacgccgtcagccaattgccagctttgaacaggcg
attgactggttaggcaaagagtcgcgccgtgggctgtcggttcagcgctacaaagggctg
ggagagatgaacccggaacagctgtgggaaaccaccatggacccggacagccgccgtatg
ctgcgcgtcaccatcaaagacgccgttgccgccgatcagctgtttaccacgctgatgggt
gacgcggtagaacctcgtcgtgcctttatcgaagaaaacgctctgcgcgccgcgaatatc
gatatctga
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