Entomomonas asaccharolytica: JHT90_03115
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Entry
JHT90_03115 CDS
T08664
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
eaz
Entomomonas asaccharolytica
Brite
KEGG Orthology (KO) [BR:
eaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eaz03016
]
JHT90_03115
Enzymes [BR:
eaz01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
JHT90_03115
Transfer RNA biogenesis [BR:
eaz03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
JHT90_03115
Prokaryotic type
tRNA splicing ligases
JHT90_03115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
QQP86246
UniProt:
A0A974NGB6
LinkDB
All DBs
Position
697549..698769
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AA seq
406 aa
AA seq
DB search
MEKKTYNLLEVANGKPIKMWTQGVPVEDDARQQLMDTAKMPFIFKHLAVMPDVHLGKGST
IGSVIPTVGAIIPAAVGVDIGCGMIAARTSLMASDLPDNLLGIRTAIEKAVPHGRTTGGN
DRGAWSNAPIEVDNSWQFLAGRFKVITDKYPKLADTNNRLHLGTLGTGNHFIEVCLDEAE
HVWFMLHSGSRGVGNAIGRLFIELAQEDMREHLANLPNKDLAYLKEGTKHYDDYVEAVSW
AQDFARLNRELMMLNVIKAVRTIITKPFETHLEAVNCHHNYVQKEQHFGLEVLVTRKGAV
SAHKGQLGIIPGSMGAKSYIVRGLGNEEAFCSCSHGAGRTMSRTKAKKMFTVADQIKATA
HVECRKDEDVIDEIPMAYKDIDAVMEAQSELVEVLHTLKQVVCVKG
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagaaaacatataatttattagaagttgccaatgggaagccgattaaaatgtgg
acacaaggtgtacctgtggaagatgatgcgcgtcaacaactaatggatactgccaaaatg
ccctttatttttaaacatcttgcagttatgccagatgtgcatttagggaaaggttctacg
attggtagtgttattcctacagttggcgctattattccagctgcagtgggtgttgatata
ggttgtggaatgattgctgcacgtacttcattgatggccagtgatttaccagataattta
ttggggattagaacagccattgaaaaggctgtaccacatggaagaacaactggaggtaat
gatagaggcgcttggtctaatgctccaattgaagtggataactcatggcagtttttagct
ggtcgatttaaagtaattacagataaataccctaaactagcggatactaataatcgtcta
catttaggtactttaggaacaggtaatcattttattgaagtctgcttagatgaagccgaa
catgtatggtttatgttacatagtggttcacgtggtgtaggaaacgctattggtagattg
tttattgaattagcgcaagaagatatgagagaacaccttgctaatttgcccaataaagat
ttggcttatttaaaagaaggaactaaacattatgatgattatgttgaagcagtaagctgg
gctcaagattttgcacgcttaaatcgtgagttaatgatgctaaatgttattaaagcagtt
agaacgatcattactaaaccatttgagacacatttagaagcggtgaactgtcatcataat
tatgtgcaaaaagagcaacactttgggctagaggtattagttactcgtaaaggtgcagta
tctgctcataaagggcaattaggaattattcctgggtctatgggagcaaaaagttatatt
gttcggggtttaggcaatgaggaagcgttttgttcttgtagtcatggcgcaggacgtacg
atgagccgaactaaggctaagaaaatgtttacagtcgctgatcaaattaaggcaactgcc
catgtagaatgccgaaaagatgaagatgtgattgatgaaattcctatggcttataaagat
attgatgctgtgatggaagctcaaagtgaacttgtagaagtattgcatactttaaaacaa
gtcgtttgtgttaaaggataa
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